Evidence map›Paper›PMID 37485815›Full record

ArticleMolecular genetics & genomic medicine2023

A de novo variant of BICRA results in Coffin-Siris syndrome 12.

Youquan Tu, Chunyan Fang, Jian Xu, Yun Zhou, Mengmeng Liang, Zuozhen Yang

Open access · goldAbstract readCase Reports
In one paragraph

Article in Molecular genetics & genomic medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. A Novel Variant in theCase reports in genetics · 2025
    Article
  3. A de novo variant of BICRA results in Coffin-Siris syndrome 12.Molecular genetics & genomic medicine · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Youquan TuDepartment of Pediatric Neurology, Ningbo Women and Children's Hospital, Ningbo, China.ORCID 0000-0001-6980-3934
Chunyan FangDepartment of Pediatric Neurology, Ningbo Women and Children's Hospital, Ningbo, China.
Jian XuDepartment of Radiology, Ningbo Women and Children's Hospital, Ningbo, China.
Yun ZhouDepartment of Pediatric Neurology, Ningbo Women and Children's Hospital, Ningbo, China.
Mengmeng LiangCipher Gene LLC, Beijing, China.
Zuozhen YangCipher Gene LLC, Beijing, China.
Cipher Gene (China) · CN

Funding

Zhejiang Medical and Health Technology Project 2022KY1154
6 · The paper itself

Abstract

backgroundBICRA, a transcript regulator, was identified as the genetic factor of Coffin-Siris syndrome 12 (CSS12) recently, which was characterized by diverse neurodevelopmental delays. Up to now, limited studies of BICRA in neurodevelopmental delay have been reported.

methodsClinical data such as EEGs, MRIs, routine blood, and physical examination were collected. Trio whole exome sequencing (WES) of the family was performed, and all variants with a minor allele frequency (<0.01) in exon and canonical splicing sites were selected for further pathogenic evaluation. Candidate variants were validated by Sanger sequencing. The BICRA-related literature was reviewed and the clinical characteristics were summarized.

resultsWe reported a CSS12 proband with a narrow and slightly clinical phenotype who only exhibited language developmental delay, hypotonia, and slight gastrointestinal features. WES revealed a de novo variant in exon 6 of BICRA [NM_015711.3: c.1666C>T, p.Gln556*]. This variant resulted in an early translation termination at 556th of BICRA, not collected in the public population database (gnomAD), and classified as pathogenic according to the ACMG guideline.

conclusionOur results expanded the pathogenic genetic and clinical spectrum of BICRA-related diseases.

Indexed as

Abnormalities, MultipleIntellectual DisabilityMicrognathismFaceHand Deformities, CongenitalHumansNeckTranscription FactorsTranscription FactorsBICRACoffin-Siris syndrome 12developmental delaystop gainvariant

Identifiers

PMID37485815
PMCPMC10655513
OpenAlexW4385186542

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.