Evidence map›Paper›PMID 37481620›Full record

ArticleCurrent microbiology2023

Exploring Prokaryotic Communities in the Guts and Mucus of Nudibranchs, and Their Similarity to Sediment and Seawater Microbiomes.

Tamara Stuij, Daniel F R Cleary, Ana R M Polónia, Sumaitt Putchakarn, Ana C C Pires, Newton C M Gomes, Nicole J de Voogd

Abstract read
In one paragraph

Article in Current microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tamara StuijDepartment of Biology, CESAM - Centre for Environmental and Marine Studies, University of Aveiro, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0001-5217-0798
Daniel F R ClearyDepartment of Biology, CESAM - Centre for Environmental and Marine Studies, University of Aveiro, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0002-6143-3390
Ana R M PolóniaDepartment of Biology, CESAM - Centre for Environmental and Marine Studies, University of Aveiro, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0003-3381-7677
Sumaitt PutchakarnInstitute of Marine Science, Burapha University, Chon Buri, 20131, Thailand.ORCID http://orcid.org/0000-0001-9077-5640
Ana C C PiresDepartment of Biology, CESAM - Centre for Environmental and Marine Studies, University of Aveiro, 3810-193, Aveiro, Portugal.
Newton C M GomesDepartment of Biology, CESAM - Centre for Environmental and Marine Studies, University of Aveiro, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0003-1934-0091
Nicole J de VoogdNaturalis Biodiversity Center, Marine Biodiversity, Leiden, The Netherlands. n.j.de.voogd@cml.leidenuniv.nl.ORCID http://orcid.org/0000-0002-7985-5604

Funding

European Commission No 813360European Social Fund SFRH/BPD/117563/2016)Fundação para a Ciência e a Tecnologia PTDC/AAC-AMB/115304/2009Portuguese Foundation for Science and Technology PTDC/BIAMIC/6473/2014 - POCI-01-0145-FEDER-016531Programa Operacional Competitividade e Internacionalização COMPETE
6 · The paper itself

Abstract

In the present study, we compared mucus and gut-associated prokaryotic communities from seven nudibranch species with sediment and seawater from Thai coral reefs using high-throughput 16S rRNA gene sequencing. The nudibranch species were identified as Doriprismatica atromarginata (family Chromodorididae), Jorunna funebris (family Discodorididae), Phyllidiella nigra, Phyllidiella pustulosa, Phyllidia carlsonhoffi, Phyllidia elegans, and Phyllidia picta (all family Phyllidiidae). The most abundant bacterial phyla in the dataset were Proteobacteria, Tenericutes, Chloroflexi, Thaumarchaeota, and Cyanobacteria. Mucus and gut-associated communities differed from one another and from sediment and seawater communities. Host phylogeny was, furthermore, a significant predictor of differences in mucus and gut-associated prokaryotic community composition. With respect to higher taxon abundance, the order Rhizobiales (Proteobacteria) was more abundant in Phyllidia species (mucus and gut), whereas the order Mycoplasmatales (Tenericutes) was more abundant in D. atromarginata and J. funebris. Mucus samples were, furthermore, associated with greater abundances of certain phyla including Chloroflexi, Poribacteria, and Gemmatimonadetes, taxa considered to be indicators for high microbial abundance (HMA) sponge species. Overall, our results indicated that nudibranch microbiomes consisted of a number of abundant prokaryotic members with high sequence similarities to organisms previously detected in sponges.

Indexed as

ChloroflexiGastropodaMicrobiotaAnimalsMucusProkaryotic CellsProteobacteriaRNA, Ribosomal, 16SSeawaterRNA, Ribosomal, 16S

Identifiers

PMID37481620
PMCPMC10363043

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.