Evidence map›Paper›PMID 37479995›Full record

ReviewGenetics, selection, evolution : GSE2023

Taming transposable elements in livestock and poultry: a review of their roles and applications.

Pengju Zhao, Chen Peng, Lingzhao Fang, Zhengguang Wang, George E Liu

Open access · goldAbstract readReview
In one paragraph

Review in Genetics, selection, evolution : GSE, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Pengju ZhaoHainan Institute of Zhejiang University, Hainan Sanya, 572000, China.ORCID http://orcid.org/0000-0001-6990-1147
Chen PengHainan Institute of Zhejiang University, Hainan Sanya, 572000, China.
Lingzhao FangCenter for Quantitative Genetics and Genomics, Aarhus University, 8000, Aarhus, Denmark. lingzhao.fang@qgg.au.dk.
Zhengguang WangHainan Institute of Zhejiang University, Hainan Sanya, 572000, China. wzhguang68@zju.edu.cn.
George E LiuAnimal Genomics and Improvement Laboratory, Beltsville Agricultural Research Center, Agricultural Research Service, USDA, Beltsville, MD, 20705, USA. george.liu@usda.gov.
Sanya University · CNAarhus University · DKAgricultural Research Service · US

Funding

Key Research and Development Project of Hainan Province ZDYF2022XDNY237National Natural Science Foundation of China 32202626Natural Science Foundation of Hainan Province 323RC522
6 · The paper itself

Abstract

Livestock and poultry play a significant role in human nutrition by converting agricultural by-products into high-quality proteins. To meet the growing demand for safe animal protein, genetic improvement of livestock must be done sustainably while minimizing negative environmental impacts. Transposable elements (TE) are important components of livestock and poultry genomes, contributing to their genetic diversity, chromatin states, gene regulatory networks, and complex traits of economic value. However, compared to other species, research on TE in livestock and poultry is still in its early stages. In this review, we analyze 72 studies published in the past 20 years, summarize the TE composition in livestock and poultry genomes, and focus on their potential roles in functional genomics. We also discuss bioinformatic tools and strategies for integrating multi-omics data with TE, and explore future directions, feasibility, and challenges of TE research in livestock and poultry. In addition, we suggest strategies to apply TE in basic biological research and animal breeding. Our goal is to provide a new perspective on the importance of TE in livestock and poultry genomes.

Indexed as

DNA Transposable ElementsLivestockAgricultureAnimalsComputational BiologyHumansPoultryDNA Transposable Elements

Identifiers

PMID37479995
PMCPMC10362595
OpenAlexW4385064548

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.