Evidence map›Paper›PMID 37478307›Full record

ArticleAnnals of botany2023

Divergent selection and climate adaptation fuel genomic differentiation between sister species of Sphagnum (peat moss).

Bryan Piatkowski, David J Weston, Blanka Aguero, Aaron Duffy, Karn Imwattana, Adam L Healey, Jeremy Schmutz, A Jonathan Shaw

Open access · hybridAbstract read
In one paragraph

Article in Annals of botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 8 citations in OpenAlex.

  1. Article
4 · The record

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5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Bryan PiatkowskiBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID 0000-0002-1334-8431
David J WestonBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA.ORCID 0000-0002-4794-9913
Blanka AgueroDepartment of Biology, Duke University, Durham, NC 27708, USA.ORCID 0000-0001-8442-5409
Aaron DuffyDepartment of Biology, Duke University, Durham, NC 27708, USA.
Karn ImwattanaDepartment of Biology, Duke University, Durham, NC 27708, USA.ORCID 0000-0001-7347-1741
Adam L HealeyGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.ORCID 0000-0002-3088-6856
Jeremy SchmutzGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806, USA.ORCID 0000-0001-8062-9172
A Jonathan ShawDepartment of Biology, Duke University, Durham, NC 27708, USA.ORCID 0000-0002-7344-9955
Duke University · USOak Ridge National Laboratory · USHudsonAlpha Institute for Biotechnology · USLawrence Berkeley National Laboratory · US

Funding

DOE BER Early Career Research Program DEB-1737899North Carolina Native Plant SocietyOak Ridge National LaboratoryU.S. Department of Energy DE-AC05-00OR22725
6 · The paper itself

Abstract

BACKGROUND AND

aimsNew plant species can evolve through the reinforcement of reproductive isolation via local adaptation along habitat gradients. Peat mosses (Sphagnaceae) are an emerging model system for the study of evolutionary genomics and have well-documented niche differentiation among species. Recent molecular studies have demonstrated that the globally distributed species Sphagnum magellanicum is a complex of morphologically cryptic lineages that are phylogenetically and ecologically distinct. Here, we describe the architecture of genomic differentiation between two sister species in this complex known from eastern North America: the northern S. diabolicum and the largely southern S. magniae.

methodsWe sampled plant populations from across a latitudinal gradient in eastern North America and performed whole genome and restriction-site associated DNA sequencing. These sequencing data were then analyzed computationally. KEY

resultsUsing sliding-window population genetic analyses we find that differentiation is concentrated within 'islands' of the genome spanning up to 400 kb that are characterized by elevated genetic divergence, suppressed recombination, reduced nucleotide diversity and increased rates of non-synonymous substitution. Sequence variants that are significantly associated with genetic structure and bioclimatic variables occur within genes that have functional enrichment for biological processes including abiotic stress response, photoperiodism and hormone-mediated signalling. Demographic modelling demonstrates that these two species diverged no more than 225 000 generations ago with secondary contact occurring where their ranges overlap.

conclusionsWe suggest that this heterogeneity of genomic differentiation is a result of linked selection and reflects the role of local adaptation to contrasting climatic zones in driving speciation. This research provides insight into the process of speciation in a group of ecologically important plants and strengthens our predictive understanding of how plant populations will respond as Earth's climate rapidly changes.

Indexed as

SphagnopsidaBiological EvolutionGenetic SpeciationGenomicsSelection, GeneticSequence Analysis, DNAclimatecomparative genomicsmolecular adaptationselectionspeciationSphagnum

Identifiers

PMID37478307
PMCPMC10666999
OpenAlexW4384945797

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.