Evidence map›Paper›PMID 37477508›Full record

ArticleCancer research2023

Single-Cell Characterization of Pulmonary Nodules Implicates Suppression of Immunosurveillance across Early Stages of Lung Adenocarcinoma.

Jane Yanagawa, Linh M Tran, Ramin Salehi-Rad, Raymond J Lim, Camelia Dumitras, Eileen Fung, William D Wallace, Ashley E Prosper, Gregory Fishbein, Conor Shea and 14 more

Open access · hybridAbstract read
In one paragraph

Article in Cancer research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 19 citations in OpenAlex.

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  11. [Recent Advances in Peripheral Immunoscore in Lung Cancer].Zhongguo fei ai za zhi = Chinese journal of lung cancer · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 3 institutions in 1 country.

Jane Yanagawa *Department of Surgery, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-9619-1814
Linh M Tran *Jonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-8597-643X
Ramin Salehi-RadJonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0003-1543-5421
Raymond J LimDepartment of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-5377-7858
Camelia DumitrasDepartment of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-8721-2812
Eileen FungDepartment of Surgery, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0009-0004-5853-4280
William D WallaceDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0002-9850-9723
Ashley E ProsperJonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-8615-5246
Gregory FishbeinDepartment of Pathology and Laboratory Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0002-3632-5654
Conor SheaDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0003-4864-2638
Rui HongDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0002-2050-9010
Bitta KahangiDepartment of Medicine, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0002-2726-0190
John J DengDepartment of Surgery, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-8355-0910
Adam C GowerDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0002-6122-7511
Bin LiuJonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0001-8083-8062
Joshua D CampbellDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0003-0780-8662
Sarah A MazzilliDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0002-9187-2722
Jennifer E BeaneDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0002-6699-2132
Humam KadaraDepartment of Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, Houston, Texas.ORCID 0000-0003-2976-9115
Marc E LenburgDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0002-5760-4708
Avrum E SpiraDepartment of Medicine and Boston University-BMC Cancer Center, Boston University, Boston, Massachusetts.ORCID 0000-0003-1467-0489
Denise R AberleJonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0002-8858-3401
Kostyantyn KrysanJonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0003-0250-1346
Steven M DubinettJonsson Comprehensive Cancer Center, David Geffen School of Medicine at UCLA, Los Angeles, California.ORCID 0000-0003-3656-8039
University of California, Los Angeles · USBoston University · USThe University of Texas MD Anderson Cancer Center · US

Funding

UCLA Pulmonary and Critical Care Medicine Training ProgramT32HL072752 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI JOHN A BELPERIO, TOMAS GANZ · 2003 to 2026
$8.3M
Integrated Molecular, Cellular, and Imaging Characterization of Screen-Detected Lung CancerU01CA196408 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ABERLE, DENISE R., DUBINETT, STEVEN M. · 2015 to 2021
$7.1M
The Lung PCA: A Multi-Dimensional Atlas of Pulmonary PremalignancyU2CCA233238 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SPIRA, AVRUM E · 2018 to 2021
$7.0M
The Boston University-UCLA Lung Cancer Biomarker Development LabU01CA214182 · NCI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI ABERLE, DENISE R., DUBINETT, STEVEN M. · 2016 to 2021
$3.1M
The Pulmonary Pre-malignancy Atlas in the Lung Adenocarcinoma SpectrumI01BX005721 · VA · VA GREATER LOS ANGELES HEALTHCARE SYSTEM · PI Linh M Tran · 2023 to 2026
–
Early detection of metastatic disease in US Veterans following surgery for early stage lung cancerI01CX002005 · VA · VA GREATER LOS ANGELES HEALTHCARE SYSTEM · PI DUBINETT, STEVEN M. · 2020 to 2022
–
BLRD VA I01 BX005721CSRD VA I01 CX002005NCI NIH HHS U01 CA196408NCI NIH HHS U01 CA214182NCI NIH HHS U2C CA233238NHLBI NIH HHS T32 HL072752
6 · The paper itself

Abstract

A greater understanding of molecular, cellular, and immunological changes during the early stages of lung adenocarcinoma development could improve diagnostic and therapeutic approaches in patients with pulmonary nodules at risk for lung cancer. To elucidate the immunopathogenesis of early lung tumorigenesis, we evaluated surgically resected pulmonary nodules representing the spectrum of early lung adenocarcinoma as well as associated normal lung tissues using single-cell RNA sequencing and validated the results by flow cytometry and multiplex immunofluorescence (MIF). Single-cell transcriptomics revealed a significant decrease in gene expression associated with cytolytic activities of tumor-infiltrating natural killer and natural killer T cells. This was accompanied by a reduction in effector T cells and an increase of CD4+ regulatory T cells (Treg) in subsolid nodules. An independent set of resected pulmonary nodules consisting of both adenocarcinomas and associated premalignant lesions corroborated the early increment of Tregs in premalignant lesions compared with the associated normal lung tissues by MIF. Gene expression analysis indicated that cancer-associated alveolar type 2 cells and fibroblasts may contribute to the deregulation of the extracellular matrix, potentially affecting immune infiltration in subsolid nodules through ligand-receptor interactions. These findings suggest that there is a suppression of immune surveillance across the spectrum of early-stage lung adenocarcinoma. SIGNIFICANCE: Analysis of a spectrum of subsolid pulmonary nodules by single-cell RNA sequencing provides insights into the immune regulation and cell-cell interactions in the tumor microenvironment during early lung tumor development.

Indexed as

AdenocarcinomaAdenocarcinoma of LungLung NeoplasmsMultiple Pulmonary NodulesHumansMonitoring, ImmunologicTomography, X-Ray ComputedTumor Microenvironment

Identifiers

PMID37477508
PMCPMC10544016
OpenAlexW4384925954

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.