Evidence map›Paper›PMID 37476356›Full record

ArticleFrontiers in computational neuroscience2023

Empirical mode decomposition of local field potential data from optogenetic experiments.

Sorinel A Oprisan, Xandre Clementsmith, Tamas Tompa, Antonieta Lavin

Abstract read
In one paragraph

Article in Frontiers in computational neuroscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
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0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

4 authors.

Sorinel A OprisanDepartment of Physics and Astronomy, College of Charleston, Charleston, SC, United States.
Xandre ClementsmithDepartment of Computer Science, College of Charleston, Charleston, SC, United States.
Tamas TompaFaculty of Healthcare, Department of Preventive Medicine, University of Miskolc, Miskolc, Hungary.
Antonieta LavinDepartment of Neuroscience, Medical University of South Carolina, Charleston, SC, United States.

Funding

Methamphetamine Effects on Prefrontal Cortical PV+ Interneurons and Resulting Cognitive DeficitsR01DA054589 · NIDA · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LAVIN, ANTONIETA · 2021 to 2025
$1.9M
Mechanisms Mediating Metamphetamine Elicited Cognitive DeficitsR21DA045889 · NIDA · MEDICAL UNIVERSITY OF SOUTH CAROLINA · PI LAVIN, ANTONIETA · 2018 to 2019
$411k
NIDA NIH HHS R01 DA054589NIDA NIH HHS R21 DA045889
6 · The paper itself

Abstract

Introduction: This study investigated the effects of cocaine administration and parvalbumin-type interneuron stimulation on local field potentials (LFPs) recorded Methods: The local network was subject to a brief 10 ms laser pulse, and the response was recorded for 2 s over 100 trials for each of the six subjects who showed stable coupling between the mPFC and the optrode. Due to the strong non-stationary and nonlinearity of the LFP, we used the adaptive, data-driven, Empirical Mode Decomposition (EMD) method to decompose the signal into orthogonal Intrinsic Mode Functions (IMFs). Results: Through trial and error, we found that seven is the optimum number of orthogonal IMFs that overlaps with known frequency bands of brain activity. We found that the Index of Orthogonality (IO) of IMF amplitudes was close to zero. The Index of Energy Conservation (IEC) for each decomposition was close to unity, as expected for orthogonal decompositions. We found that the power density distribution vs. frequency follows a power law with an average scaling exponent of ~1.4 over the entire range of IMF frequencies 2-2,000 Hz. Discussion: The scaling exponent is slightly smaller for cocaine than the control, suggesting that neural activity avalanches under cocaine have longer life spans and sizes.

Indexed as

cocainefast-spiking neuronsmedial prefrontal cortexneural avalanchesorthogonal decomposition

Identifiers

PMID37476356
PMCPMC10354259

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.