Evidence map›Paper›PMID 37474871›Full record

ArticlePlanta2023

BpCYP76AD15 is involved in betaxanthin biosynthesis in bougainvillea callus.

Sho Ohno, Rika Kokado, Rikako Makishima, Motoaki Doi

Abstract read
PubMed Publisher
In one paragraph

Article in Planta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sho OhnoGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan. ohno.sho.3c@kyoto-u.ac.jp.ORCID http://orcid.org/0000-0002-0810-0327
Rika KokadoGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Rikako MakishimaGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Motoaki DoiGraduate School of Agriculture, Kyoto University, Kyoto, Kyoto, 606-8502, Japan.
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionBpCYP76AD15 is involved in betaxanthin biosynthesis in callus, but not in bracts, in bougainvillea. Bougainvillea (Bougainvillea peruviana) is a climbing tropical ornamental tree belonging to Nyctaginaceae. Pigments that are conferring colorful bracts in bougainvillea are betalains, and that conferring yellow color are betaxanthins. In general, for red-to-purple betacyanin biosynthesis, α clade CYP76AD that has tyrosine hydroxylase and DOPA oxygenase activity is required, while for betaxanthin biosynthesis, β clade CYP76AD that has only tyrosine hydroxylase is required. To date, betaxanthin biosynthesis pathway genes have not been identified yet in bougainvillea. Since bougainvillea is phylogenetically close to four-O-clock (Mirabilis jalapa), and it was reported that β clade CYP76AD, MjCYP76AD15, is involved in floral betaxanthin biosynthesis in four-O-clock. Thus, we hypothesized that orthologous gene of MjCYP76AD15 in bougainvillea might be involved in bract betaxanthin biosynthesis. To test the hypothesis, we attempted to identify β clade CYP76AD gene from yellow bracts by RNA-seq; however, we could not. Instead, we found that callus accumulated betaxanthin and that β clade CYP76AD gene, BpCYP76AD15, were expressed in callus. We validated BpCYP76AD15 function by transgenic approach (agro-infiltration and over-expression in transgenic tobacco), and it was suggested that BpCYP76AD15 is involved in betaxanthin biosynthesis in callus, but not in bracts in bougainvillea. Interestingly, our data also indicate the existence of two pathways for betaxanthin biosynthesis (β clade CYP76AD-dependent and -independent), and the latter pathway is important for betaxanthin biosynthesis in bougainvillea bracts.

Indexed as

MirabilisNyctaginaceaeBetaxanthinsPicolinic AcidsTyrosine 3-MonooxygenasebetaxanthinBetaxanthinsPicolinic AcidsTyrosine 3-MonooxygenaseBetalainBractDOPA-betaxanthinNyctaginaceaeYellow pigment

Identifiers

PMID37474871
OpenAlexW4384926310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.