Evidence map›Paper›PMID 37470935›Full record

ArticleApplied biochemistry and biotechnology2024

Differential Protein Expression in Response to Varlitinib Treatment in Oral Cancer Cell Line: an In Vitro Therapeutic Approach.

Fariha Tanveer, Amber Ilyas, Basir Syed, Zehra Hashim, Aftab Ahmed, Shamshad Zarina

Abstract read
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Article in Applied biochemistry and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Fariha TanveerDr. Zafar H. Zaidi Center for Proteomics, University of Karachi, Karachi, 75270, Pakistan.ORCID http://orcid.org/0000-0002-2556-3147
Amber IlyasDr. Zafar H. Zaidi Center for Proteomics, University of Karachi, Karachi, 75270, Pakistan.ORCID http://orcid.org/0000-0002-2994-3884
Basir SyedSchool of Pharmacy, Chapman University, Orange, CA, USA.ORCID http://orcid.org/0000-0002-3407-9525
Zehra HashimDr. Zafar H. Zaidi Center for Proteomics, University of Karachi, Karachi, 75270, Pakistan.ORCID http://orcid.org/0000-0001-6750-093X
Aftab AhmedSchool of Pharmacy, Chapman University, Orange, CA, USA.ORCID http://orcid.org/0000-0001-9708-2150
Shamshad ZarinaDr. Zafar H. Zaidi Center for Proteomics, University of Karachi, Karachi, 75270, Pakistan. szarina@uok.edu.pk.ORCID http://orcid.org/0000-0003-0781-7171
University of Karachi · PKChapman University · US

Funding

University of Karachi NCP 2019
6 · The paper itself

Abstract

Epidermal growth factor receptor (EGFR) is the most frequently overexpressed receptor histologically exhibited by oral squamous cell carcinoma (OSCC) patients. Aberrated EGFR signaling may lead to recurrence and metastasis, thus laying the foundation of targeted therapy. Deactivating EGFR is likely to prevent downstream signaling thus resulting in apoptosis. Tyrosine kinase inhibitors (TKIs) have come into play to revert aggressiveness of OSCC. We exploited comparative proteomic analyses based on anti-EGFR potential of varlitinib, using cellular proteomes from treated and untreated groups of oral cancer cells to identify protein players functional during oral carcinogenesis. Following separation by two-dimensional electrophoresis, differentially expressed cellular proteins (varlitinib-treated and untreated cells) were analyzed and later identified using QTOF mass spectrometer. In silico analysis for protein-protein interaction was carried out using STRING. Six differentially expressed proteins were identified as binding immunoglobulin protein (BiP), heat shock protein 7 C (HSP7C), protein disulfide isomerase 1 A (PDIA1), vimentin (VIME), keratin type I cytoskeletal 14 (K1C14), and β-Actin (ACTB). Relative expression of five proteins was found to be downregulated upon varlitinib treatment, whereas only K1C14 was upregulated in treated cells compared to control. Protein network analysis depicts the interaction between BiP, PDIA1, VIME, etc. indicating their role in oral carcinogenesis. Oral cancer cells show proteome shift based on varlitinib treatment compared to corresponding controls. Our data suggest candidature of varlitinib as a potent therapeutic agent and BiP, PDIA1, HSP7C, VIME, and β-Actin as complementary/prognostic markers of OSCC.

Indexed as

Mouth NeoplasmsCarcinoma, Squamous CellCell Line, TumorErbB ReceptorsGene Expression Regulation, NeoplasticHumansNeoplasm ProteinsProteomicsEGFR protein, humanErbB ReceptorsNeoplasm ProteinsOral cancerProteomicsSignaling pathwayTumor markerVarlitinib

Identifiers

PMID37470935
OpenAlexW4384818575

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.