Evidence map›Paper›PMID 37467715›Full record

ArticleCell reports. Medicine2023

Multimodal immune cell phenotyping in GI biopsies reveals microbiome-related T cell modulations in human GvHD.

Sebastian Jarosch, Jan Köhlen, Sakhila Ghimire, Erik Thiele Orberg, Monika Hammel, Doris Gaag, Matthias Evert, Klaus-Peter Janssen, Andreas Hiergeist, André Gessner and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 26 citations in OpenAlex.

  1. Review
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  9. Review
  10. Microbiota interaction with Tregs: a target for colitis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  11. Article
  12. Gut microbiota and acute graft-versus-host disease.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2025
    Article
  13. Article
  14. Article
  15. Review
  16. Cellular and molecular basis of proximal small intestine disorders.Nature reviews. Gastroenterology & hepatology · 2024
    Review
  17. Article
  18. Article
  19. Review
  20. Spatial Multiplexing and Omics.Nature reviews. Methods primers · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Sebastian JaroschInstitute for Medical Microbiology, Immunology and Hygiene, Technical University of Munich (TUM), 81675 Munich, Germany; Boehringer Ingelheim Pharma GmbH & Co. KG, Drug Discovery Sciences, 88397 Biberach an der Riß, Germany.
Jan KöhlenInstitute for Medical Microbiology, Immunology and Hygiene, Technical University of Munich (TUM), 81675 Munich, Germany.
Sakhila GhimireDepartment of Internal Medicine 3, University Medical Center, 93053 Regensburg, Germany.
Erik Thiele OrbergDepartment of Medicine III, Technical University of Munich (TUM), School of Medicine, Klinikum rechts der Isar TUM, 81675 Munich, Germany; German Cancer Consortium (DKTK), Partner Site Munich, and German Cancer Research Center (DKFZ), Heidelberg, Germany.
Monika HammelInstitute for Medical Microbiology, Immunology and Hygiene, Technical University of Munich (TUM), 81675 Munich, Germany.
Doris GaagInstitute for Pathology, University of Regensburg, 93053 Regensburg, Germany.
Matthias EvertInstitute for Pathology, University of Regensburg, 93053 Regensburg, Germany.
Klaus-Peter JanssenDepartment of Surgery, Klinikum rechts der Isar, Technical University of Munich, 81675 Munich, Germany.
Andreas HiergeistInstitute of Clinical Microbiology and Hygiene, University Medical Center, 93053 Regensburg, Germany.
André GessnerInstitute of Clinical Microbiology and Hygiene, University Medical Center, 93053 Regensburg, Germany.
Daniela WeberDepartment of Internal Medicine 3, University Medical Center, 93053 Regensburg, Germany.
Elisabeth MeedtDepartment of Internal Medicine 3, University Medical Center, 93053 Regensburg, Germany.
Hendrik PoeckDepartment of Internal Medicine 3, University Medical Center, 93053 Regensburg, Germany; Leibniz Institute for Immuntherapie (LIT), Regensburg, Germany.
Elvira D'IppolitoInstitute for Medical Microbiology, Immunology and Hygiene, Technical University of Munich (TUM), 81675 Munich, Germany.
Ernst HollerDepartment of Internal Medicine 3, University Medical Center, 93053 Regensburg, Germany. Electronic address: ernst.holler@klinik.uni-regensburg.de.
Dirk H BuschInstitute for Medical Microbiology, Immunology and Hygiene, Technical University of Munich (TUM), 81675 Munich, Germany; German Center for Infection Research (DZIF), Partner Site Munich, 81675 Munich, Germany. Electronic address: dirk.busch@tum.de.
Technical University of Munich · DEInstitute of Medical Microbiology and Hygiene · DEKlinikum rechts der Isar · DEUniversity of Regensburg · DELeibniz Institute for Immunotherapy

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute graft-versus-host disease (aGvHD) is a significant complication after allogeneic hematopoietic stem cell transplantation (aHSCT), but major factors determining disease severity are not well defined yet. By combining multiplexed tissue imaging and single-cell RNA sequencing on gastrointestinal biopsies from aHSCT-treated individuals with fecal microbiome analysis, we link high microbiome diversity and the abundance of short-chain fatty acid-producing bacteria to the sustenance of suppressive regulatory T cells (Tregs). Furthermore, aGvHD severity strongly associates with the clonal expansion of mainly CD8 T cells, which we find distributed over anatomically distant regions of the gut, persistent over time, and inversely correlated with the presence of suppressive Tregs. Overall, our study highlights the pathophysiological importance of expanded CD8 T cell clones in the progression of aGvHD toward more severe clinical manifestations and strongly supports the further development of microbiome interventions as GvHD treatment via repopulation of the gut Treg niche to suppress inflammation.

Indexed as

Graft vs Host DiseaseHematopoietic Stem Cell TransplantationMicrobiotaCD8-Positive T-LymphocytesGastrointestinal TractHumansallogeneic hematopoietic stem cell transplantationchip cytometrygastrointestinal biopsiesgraft-versus-host diseasemicrobiomemultimodal immune cell phenotypingmultiplexed tissue imagingsingle-cell RNA sequencingT cell infiltrate

Identifiers

PMID37467715
PMCPMC10394271
OpenAlexW4384700927

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.