Evidence map›Paper›PMID 37467337›Full record

ArticleScience advances2023

More than bad luck: Cancer and aging are linked to replication-driven changes to the epigenome.

Christopher J Minteer, Kyra Thrush, John Gonzalez, Peter Niimi, Mariya Rozenblit, Joel Rozowsky, Jason Liu, Mor Frank, Thomas McCabe, Albert T Higgins-Chen and 5 more

Erratum issuedAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Christopher J MinteerDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-5799-7452
Kyra ThrushDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-3991-9597
John GonzalezDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-1020-8783
Peter NiimiDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.
Mariya RozenblitDepartment of Internal Medicine, Section of Medical Oncology, Yale School of Medicine, New Haven, CT, USA.
Joel RozowskyDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.ORCID 0000-0002-3565-0762
Jason LiuDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.ORCID 0000-0001-7197-7319
Mor FrankDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.
Thomas McCabeDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-6184-4683
Albert T Higgins-ChenDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0003-2904-2741
Erin HofstatterDepartment of Internal Medicine, Section of Medical Oncology, Yale School of Medicine, New Haven, CT, USA.
Lajos PusztaiDepartment of Internal Medicine, Section of Medical Oncology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-9632-6686
Kenneth BeckmanBiomedical Genomics Center, University of Minnesota, Minneapolis, MN, USA.ORCID 0000-0001-8876-0706
Mark GersteinDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.ORCID 0000-0002-9746-3719
Morgan E LevineDepartment of Pathology, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-9890-9324

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
MEDICAL INFORMATICS RESEARCH TRAINING AT YALET15LM007056 · NLM · YALE UNIVERSITY · PI Mark Bender Gerstein, LUCILA OHNO-MACHADO · 1987 to 2026
$22.2M
QUANTITATIVE ASSESSMENT OF BIOLOGICAL AGE AND ITS APPLICATIONSR01AG065403 · NIA · YALE UNIVERSITY · PI Vadim N. Gladyshev, Albert Tzongyang Higgins-Chen · 2020 to 2026
$4.2M
AMYLOIDOGENIC INDUCTION OF CELLULAR SENESCENCE IN ALZHEIMER'S DISEASER01AG068285 · NIA · YALE UNIVERSITY · PI MIRANKER, ANDREW D. · 2020 to 2024
$2.1M
NCATS NIH HHS UL1 TR001863NIA NIH HHS R01 AG065403NIA NIH HHS R01 AG068285NLM NIH HHS T15 LM007056
6 · The paper itself

Abstract

Aging is a leading risk factor for cancer. While it is proposed that age-related accumulation of somatic mutations drives this relationship, it is likely not the full story. We show that aging and cancer share a common epigenetic replication signature, which we modeled using DNA methylation from extensively passaged immortalized human cells in vitro and tested on clinical tissues. This signature, termed CellDRIFT, increased with age across multiple tissues, distinguished tumor from normal tissue, was escalated in normal breast tissue from cancer patients, and was transiently reset upon reprogramming. In addition, within-person tissue differences were correlated with predicted lifetime tissue-specific stem cell divisions and tissue-specific cancer risk. Our findings suggest that age-related replication may drive epigenetic changes in cells and could push them toward a more tumorigenic state.

Indexed as

EpigenomeNeoplasmsAgingEpigenesis, GeneticHumansRisk Factors

Identifiers

PMID37467337
PMCPMC10355820

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.