Evidence map›Paper›PMID 37467322›Full record

ArticleScience advances2023

Parkin regulates amino acid homeostasis at mitochondria-lysosome (M/L) contact sites in Parkinson's disease.

Wesley Peng, Leonie F Schröder, Pingping Song, Yvette C Wong, Dimitri Krainc

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Wesley PengDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.ORCID 0000-0003-4683-170X
Leonie F SchröderDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.ORCID 0000-0003-1064-6350
Pingping SongDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.
Yvette C WongDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.ORCID 0000-0002-3188-4342
Dimitri KraincDepartment of Neurology, Northwestern University Feinberg School of Medicine, Chicago, Illinois 60611, USA.ORCID 0000-0002-4716-1886
Northwestern University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
Mechanistic Analysis of Genetic Modifiers in Parkinson's DiseaseR35NS122257 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI DIMITRI KRAINC · 2021 to 2026
$6.8M
Molecular mechanisms underlying mitochondria-lysosome membrane contact sites in neuronal function and neurodegenerationR00NS109252 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WONG, YVETTE · 2020 to 2023
$883k
Regulation of neuronal calcium transfer between mitochondria and lysosomes in health and neurodegeneration.F30AG066333 · NIA · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PENG, WESLEY J. · 2019 to 2022
$186k
Molecular mechanisms underlying mitochondria-lysosome membrane contact sites in neuronal function and neurodegenerationK99NS109252 · NINDS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WONG, YVETTE · 2018 to 2019
$179k
NCI NIH HHS P30 CA060553NIA NIH HHS F30 AG066333NINDS NIH HHS K99 NS109252NINDS NIH HHS R00 NS109252NINDS NIH HHS R35 NS122257
6 · The paper itself

Abstract

Mutations in the E3 ubiquitin ligase parkin are the most common cause of early-onset Parkinson's disease (PD). Although parkin modulates mitochondrial and endolysosomal homeostasis during cellular stress, whether parkin regulates mitochondrial and lysosomal cross-talk under physiologic conditions remains unresolved. Using transcriptomics, metabolomics and super-resolution microscopy, we identify amino acid metabolism as a disrupted pathway in iPSC-derived dopaminergic neurons from patients with parkin PD. Compared to isogenic controls, parkin mutant neurons exhibit decreased mitochondria-lysosome contacts via destabilization of active Rab7. Subcellular metabolomics in parkin mutant neurons reveals amino acid accumulation in lysosomes and their deficiency in mitochondria. Knockdown of the Rab7 GTPase-activating protein TBC1D15 restores mitochondria-lysosome tethering and ameliorates cellular and subcellular amino acid profiles in parkin mutant neurons. Our data thus uncover a function of parkin in promoting mitochondrial and lysosomal amino acid homeostasis through stabilization of mitochondria-lysosome contacts and suggest that modulation of interorganelle contacts may serve as a potential target for ameliorating amino acid dyshomeostasis in disease.

Indexed as

Parkinson DiseaseDopaminergic NeuronsGTPase-Activating ProteinsHomeostasisHumansLysosomesMitochondriaUbiquitin-Protein LigasesGTPase-Activating ProteinsTBC1D15 protein, humanUbiquitin-Protein Ligases

Identifiers

PMID37467322
PMCPMC10355824
OpenAlexW4384819136

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.