Evidence map›Paper›PMID 37466950›Full record

ArticleInvestigative ophthalmology & visual science2023

Usher Syndrome on the Island of Ireland: A Genotype-Phenotype Review.

Kirk A J Stephenson, Laura Whelan, Julia Zhu, Adrian Dockery, Niamh C Wynne, Rebecca M Cairns, Claire Kirk, Jacqueline Turner, Emma S Duignan, James J O'Byrne and 4 more

Open access · goldAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Kirk A J StephensonClinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.
Laura WhelanThe School of Genetics & Microbiology, Trinity College Dublin, Dublin, Ireland.
Julia ZhuClinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.
Adrian DockeryNext Generation Sequencing Laboratory, Pathology Department, Mater Misericordiae University Hospital, Dublin, Ireland.
Niamh C WynneThe Research Foundation, Royal Victoria Eye & Ear Hospital, Dublin, Ireland.
Rebecca M CairnsOphthalmology Department, Belfast Health and Social Care Trust Hospitals, Belfast, Northern Ireland.
Claire KirkOphthalmology Department, Belfast Health and Social Care Trust Hospitals, Belfast, Northern Ireland.
Jacqueline TurnerClinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.
Emma S DuignanThe Research Foundation, Royal Victoria Eye & Ear Hospital, Dublin, Ireland.
James J O'ByrneClinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.
Giuliana SilvestriOphthalmology Department, Belfast Health and Social Care Trust Hospitals, Belfast, Northern Ireland.
Paul F KennaThe School of Genetics & Microbiology, Trinity College Dublin, Dublin, Ireland.
G Jane FarrarThe School of Genetics & Microbiology, Trinity College Dublin, Dublin, Ireland.
David J KeeganClinical Ophthalmic Genetics Unit, Mater Misericordiae University Hospital, Dublin, Ireland.
Mater Misericordiae University Hospital · IEBelfast Health and Social Care Trust · GBTrinity College Dublin · IERoyal Victoria Eye and Ear Hospital · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Usher syndrome (USH) is a genetically heterogeneous group of autosomal recessive (AR) syndromic inherited retinal degenerations (IRDs) representing 50% of deaf-blindness. All subtypes include retinitis pigmentosa, sensorineural hearing loss, and vestibular abnormalities. Thorough phenotyping may facilitate genetic diagnosis and intervention. Here we report the clinical/genetic features of an Irish USH cohort. Methods: USH patients were selected from the Irish IRD registry (Target 5000). Patients were examined clinically (deep-phenotyping) and genetically using a 254 IRD-associated gene target capture sequencing panel, USH2A exon, and whole genome sequencing. Results: The study identified 145 patients (24.1% USH1 [n = 35], 73.8% USH2 [n = 107], 1.4% USH3 [n = 2], and 0.7% USH4 [n = 1]). A genetic diagnosis was reached in 82.1%, the majority (80.7%) being MYO7A or USH2A genotypes. Mean visual acuity and visual field (VF) were 0.47 ± 0.58 LogMAR and 31.3° ± 32.8°, respectively, at a mean age of 43 years. Legal blindness criteria were met in 40.7%. Cataract was present in 77.4%. ADGRV1 genotypes had the most VF loss, whereas USH2A patients had greater myopia and CDH23 had the most astigmatism. Variants absent from gnomAD non-Finnish Europeans and ClinVar represented more than 20% of the variants identified and were detected in ADGRV1, ARSG, CDH23, MYO7A, and USH2A. Conclusions: USH is a genetically diverse group of AR IRDs that have a profound impact on affected individuals and their families. The prevalence and phenotype/genotype characteristics of USH in Ireland have, as yet, gone unreported. Understanding the genotype of Irish USH patients may guide clinical and genetic characterization facilitating access to existing/novel therapeutics.

Indexed as

Retinal DegenerationUsher SyndromesExtracellular Matrix ProteinsGenotypeHumansIrelandMutationPedigreePhenotypeExtracellular Matrix Proteins

Identifiers

PMID37466950
PMCPMC10362925
OpenAlexW4384664099

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.