Evidence map›Paper›PMID 37466550›Full record

ArticleJournal of applied oral science : revista FOB2023

Association of rs142548867 (EEFSEC) and periodontitis Grade C in a young Brazilian population.

Camila Schmidt Stolf, Tiago Taiete, Paloma A do Nascimento, Hélvis E S Paz, Enílson Antônio Sallum, Karina Gonzalez Silvério Ruiz, Márcio Zaffalon Casati, Renato Corrêa Viana Casarin

Open access · diamondAbstract read
In one paragraph

Article in Journal of applied oral science : revista FOB, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Camila Schmidt StolfUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.
Tiago TaieteUniversidade de Araras, Departamento de Odontologia, Araras, SP, Brasil.
Paloma A do NascimentoUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.
Hélvis E S PazUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.ORCID http://orcid.org/0000-0002-0619-2547
Enílson Antônio SallumUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.
Karina Gonzalez Silvério RuizUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.ORCID http://orcid.org/0000-0001-5879-9095
Márcio Zaffalon CasatiUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.
Renato Corrêa Viana CasarinUniversidade Estadual de Campinas - UNICAMP, Faculdade de Odontologia de Piracicaba, Departamento de Prótese e Periodontia, Piracicaba, SP, Brasil.
Universidade Estadual de Campinas (UNICAMP) · BRCentro Universitario de Araras Dr Edmunso Ulson · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPeriodontitis Stage III-IV, Grade C (PerioC) is a severe form of Periodontitis. The individual genetic background has been shown to be an important etiopathogenic factor for the development of this disease in young, systemically healthy, and non-smokers patients. Recently, after exome sequencing of families with a history of the disease, PerioC was associated with three single nucleotide variations (SNVs) - rs142548867 (EEFSEC), rs574301770 (ZNF136), and rs72821893 (KRT25) - which were classified as deleterious or possibly harmful by prediction algorithms.

objectiveSeeking to validate these findings in a cohort evaluation, this study aims to characterize the allele and genotypic frequency of the SNVs rs142548867, rs574301770, and rs72821893 in the Brazilian population with PerioC and who were periodontally healthy (PH). METHODOLOGY: Thus, epithelial oral cells from 200 PerioC and 196 PH patients were harvested at three distinct centers at the Brazilian Southern region, their DNA were extracted, and the SNVs rs142548867, rs574301770, rs72821893 were genotyped using 5'-nuclease allelic discrimination assay. Differences in allele and genotype frequencies were analyzed using Fisher's Exact Test. Only the SNV rs142548867 (C > T) was associated with PerioC.

resultsThe CT genotype was detected more frequently in patients with PerioC when compared with PH subjects (6% and 0.5% respectively), being significantly associated with PerioC (odds ratio 11.76, p=0.02).

conclusionrs142548867 represents a potential risk for the occurrence of this disease in the Brazilian population.

Indexed as

PeriodontitisPolymorphism, Single NucleotideAllelesBrazilCase-Control StudiesGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansPeptide Elongation FactorsEEFSEC protein, humanPeptide Elongation Factors

Identifiers

PMID37466550
PMCPMC10356128
OpenAlexW4384572409

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.