Evidence map›Paper›PMID 37465097›Full record

ArticleProceedings of SPIE--the International Society for Optical Engineering2023

Unsupervised Registration Refinement for Generating Unbiased Eye Atlas.

Ho Hin Lee, Yucheng Tang, Shunxing Bao, Qi Yang, Xin Xu, Kevin L Schey, Jeffrey M Spraggins, Yuankai Huo, Bennett A Landman

Open access · greenAbstract read
In one paragraph

Article in Proceedings of SPIE--the International Society for Optical Engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Characterizing Low-cost Registration for Photographic Images to Computed Tomography.Proceedings of SPIE--the International Society for Optical Engineering · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Ho Hin LeeDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA 37212.
Yucheng TangDepartment of Electrical and Computer Engineering, Vanderbilt University, Nashville, TN, USA.
Shunxing BaoDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA 37212.
Qi YangDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA 37212.
Xin XuDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA 37212.
Kevin L ScheyDepartment of Biochemistry, Vanderbilt University, Nashville, TN, USA 37232.
Jeffrey M SpragginsDepartment of Cell and Developmental Biology, Vanderbilt University, Nashville, TN, USA 37232.
Yuankai HuoDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA 37212.
Bennett A LandmanDepartment of Computer Science, Vanderbilt University, Nashville, TN, USA 37212.
Vanderbilt University · US

Funding

Vanderbilt University Biomolecular Multimodal Imaging Center for 3-Dimensional Tissue MappingU54DK120058 · NIDDK · VANDERBILT UNIVERSITY · PI HARRIS, RAYMOND C. · 2018 to 2021
$5.7M
Pancreas Organ Specific ProjectU54EY032442 · NEI · VANDERBILT UNIVERSITY · PI CAPRIOLI, RICHARD M · 2020 to 2024
$5.7M
Controlling Quality and Capturing Uncertainty in Advanced Diffusion Weighted MRIR01EB017230 · NIBIB · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2015 to 2024
$5.1M
Computer-Assisted functional neurosurgeryR01EB006136 · NIBIB · VANDERBILT UNIVERSITY · PI DAWANT, BENOIT M. · 2006 to 2013
$4.0M
Computer-Assited Functional NeurosurgeryR01NS095291 · NINDS · VANDERBILT UNIVERSITY · PI DAWANT, BENOIT M., DHAESE, PIERRE F. · 2015 to 2018
$2.4M
NEI NIH HHS U54 EY032442NIBIB NIH HHS R01 EB006136NIBIB NIH HHS R01 EB017230NIDDK NIH HHS U54 DK120058NINDS NIH HHS R01 NS095291
6 · The paper itself

Abstract

With the confounding effects of demographics across large-scale imaging surveys, substantial variation is demonstrated with the volumetric structure of orbit and eye anthropometry. Such variability increases the level of difficulty to localize the anatomical features of the eye organs for populational analysis. To adapt the variability of eye organs with stable registration transfer, we propose an unbiased eye atlas template followed by a hierarchical coarse-to-fine approach to provide generalized eye organ context across populations. Furthermore, we retrieved volumetric scans from 1842 healthy patients for generating an eye atlas template with minimal biases. Briefly, we select 20 subject scans and use an iterative approach to generate an initial unbiased template. We then perform metric-based registration to the remaining samples with the unbiased template and generate coarse registered outputs. The coarse registered outputs are further leveraged to train a deep probabilistic network, which aims to refine the organ deformation in unsupervised setting. Computed tomography (CT) scans of 100 de-identified subjects are used to generate and evaluate the unbiased atlas template with the hierarchical pipeline. The refined registration shows the stable transfer of the eye organs, which were well-localized in the high-resolution (0.5

Indexed as

Computed TomographyEye AtlasMedical Image RegistrationUnbiased Template

Identifiers

PMID37465097
PMCPMC10353780
OpenAlexW4362604017

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.