Evidence map›Paper›PMID 37464246›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Rattus norvegicus Spermatogenesis Colony-Forming Assays.

Karen M Chapman, Ashutosh Pudasaini, Morgan N Vanderbeck, F Kent Hamra

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
7.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Karen M ChapmanDepartment of Biophysics, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Ashutosh PudasainiGenomeDesigns Laboratory, LLC, Richardson, TX, USA.
Morgan N VanderbeckGenomeDesigns Laboratory, LLC, Richardson, TX, USA.
F Kent HamraCecil H. & Ida Green Center for Reproductive Biology Sciences, University of Texas Southwestern Medical Center, Dallas, TX, USA. kent.hamra@utsouthwestern.edu.
GenomeDesigns Lab (United States) · USThe University of Texas Southwestern Medical Center · US

Funding

Sperm Stem Cell Libraries for Biological ResearchR24OD011108 · OD · UT SOUTHWESTERN MEDICAL CENTER · PI HAMRA, F. KENT · 2012 to 2014
$1.7M
Rat Germline Gene Editing Products and ServicesU44DA044885 · NIDA · GENOMEDESIGNS LABORATORY, LLC · PI HAMRA, F. KENT, PUDASAINI, ASHUTOSH · 2019 to 2020
$1.2M
NIDA NIH HHS U44 DA044885NIH HHS R24 OD011108
6 · The paper itself

Abstract

Knowledge gaps persist on signaling pathways and metabolic states in germ cells sufficient to support spermatogenesis independent of a somatic environment. Consequently, methods to culture mammalian stem cells through spermatogenesis in defined systems have not been established. Lack of success at culturing mammalian stem cells through spermatogenesis in defined systems reflects an inability to experimentally recapitulate biochemical events that develop in germ cells within the testis-specific seminiferous epithelium. Complex germ and somatic cell associations that develop each seminiferous epithelial cycle support such a hypothesis, conceivably explaining why highly pure mammalian spermatogonia do not effectively develop into and through meiosis without somatic cells. Here, we outline an in vitro spermatogenesis colony-forming assay to study how differentiating spermatogonial syncytia develop from rat spermatogonial stem cell lines. Robust spermatogonial differentiation under defined culture conditions, once established, is anticipated to facilitate molecular biology studies on pre-meiotic steps in gametogenesis by providing soma-free bioassays to systematically identify spermatogenic factors that promote meiotic progression in vitro.

Indexed as

SpermatogenesisTestisAnimalsCell DifferentiationMaleMammalsMeiosisRatsSeminiferous EpitheliumSpermatogoniaDifferentiationGametogenesisGermline gene targetingGermline stem cellIn vitroProliferationSelf-renewalSpermatogenesisSpermatogonial stem cell

Identifiers

PMID37464246
OpenAlexW4384664706

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.