Evidence map›Paper›PMID 37463427›Full record

ArticleMolecular biology and evolution2023

Rewiring of Aminoacyl-tRNA Synthetase Localization and Interactions in Plants With Extensive Mitochondrial tRNA Gene Loss.

Jessica M Warren, Amanda K Broz, Ana Martinez-Hottovy, Christian Elowsky, Alan C Christensen, Daniel B Sloan

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Article in Molecular biology and evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. The multichromosomal structure evolution ofFrontiers in plant science · 2026
    Article
  6. Article
  7. Photosynthetic demands on translational machinery drive retention of redundant tRNA metabolism in plant organelles.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Review
  9. Genome copy number predicts extreme evolutionary rate variation in plant mitochondrial DNA.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Review
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jessica M WarrenCenter for Mechanisms of Evolution, Biodesign Institute and School of Life Sciences, Arizona State University, Tempe, AZ, USA.ORCID 0000-0001-5263-0475
Amanda K BrozDepartment of Biology, Colorado State University, Fort Collins, CO, USA.ORCID 0000-0001-5663-3569
Ana Martinez-HottovySchool of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, USA.
Christian ElowskyDepartment of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, USA.
Alan C ChristensenSchool of Biological Sciences, University of Nebraska-Lincoln, Lincoln, NE, USA.
Daniel B SloanDepartment of Biology, Colorado State University, Fort Collins, CO, USA.ORCID 0000-0002-3618-0897
University of Nebraska–Lincoln · USColorado State University · USArizona State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The number of tRNAs encoded in plant mitochondrial genomes varies considerably. Ongoing loss of bacterial-like mitochondrial tRNA genes in many lineages necessitates the import of nuclear-encoded counterparts that share little sequence similarity. Because tRNAs are involved in highly specific molecular interactions, this replacement process raises questions about the identity and trafficking of enzymes necessary for the maturation and function of newly imported tRNAs. In particular, the aminoacyl-tRNA synthetases (aaRSs) that charge tRNAs are usually divided into distinct classes that specialize on either organellar (mitochondrial and plastid) or nuclear-encoded (cytosolic) tRNAs. Here, we investigate the evolution of aaRS subcellular localization in a plant lineage (Sileneae) that has experienced extensive and rapid mitochondrial tRNA loss. By analyzing full-length mRNA transcripts (PacBio Iso-Seq), we found predicted retargeting of many ancestrally cytosolic aaRSs to the mitochondrion and confirmed these results with colocalization microscopy assays. However, we also found cases where aaRS localization does not appear to change despite functional tRNA replacement, suggesting evolution of novel interactions and charging relationships. Therefore, the history of repeated tRNA replacement in Sileneae mitochondria reveals that differing constraints on tRNA/aaRS interactions may determine which of these alternative coevolutionary paths is used to maintain organellar translation in plant cells.

Indexed as

Amino Acyl-tRNA SynthetasesCell NucleusGenome, PlantMitochondriaRNA, TransferAmino Acyl-tRNA SynthetasesRNA, Transferaminoacyl-tRNA synthetaseplant mitochondriasubcellular localizationtRNA

Identifiers

PMID37463427
PMCPMC10375062
OpenAlexW4384624951

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.