Evidence map›Paper›PMID 37463329›Full record

ArticleJournal of proteome research2023

A Rapid and Efficient Method for the Extraction of Histone Proteins.

Charles Homsi, Roshan Elizabeth Rajan, Robin Minati, Edlie St-Hilaire, Eric Bonneil, Simon F Dufresne, Hugo Wurtele, Alain Verreault, Pierre Thibault

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Charles HomsiInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Roshan Elizabeth RajanInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Robin MinatiInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Edlie St-HilaireMaisonneuve-Rosemont Hospital Research Center, Montréal, Québec H1T 2M4, Canada.
Eric BonneilInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec H3T 1J4, Canada.ORCID 0000-0002-4039-3131
Simon F DufresneDivision of Infectious Diseases and Clinical Microbiology, Department of Medicine, Maisonneuve-Rosemont Hospital, Montréal, Québec H1T 2M4, Canada.
Hugo WurteleDepartment of Medicine, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Alain VerreaultInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec H3T 1J4, Canada.
Pierre ThibaultInstitute for Research in Immunology and Cancer, Université de Montréal, Montréal, Québec H3T 1J4, Canada.ORCID 0000-0001-5993-0331
Institute for Research in Immunology and Cancer · CAHôpital Maisonneuve-Rosemont · CAUniversité de Montréal · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Current protocols used to extract and purify histones are notoriously tedious, especially when using yeast cells. Here, we describe the use of a simple filter-aided sample preparation approach enabling histone extraction from yeast and mammalian cells using acidified ethanol, which not only improves extraction but also inactivates histone-modifying enzymes. We show that our improved method prevents N-terminal clipping of H3, an artifact frequently observed in yeast cells using standard histone extraction protocols. Our method is scalable and provides efficient recovery of histones when extracts are prepared from as few as two million yeast cells. We further demonstrate the application of this approach for the analysis of histone modifications in fungal clinical isolates available in a limited quantity. Compared with standard protocols, our method enables the study of histones and their modifications in a faster, simpler, and more robust manner.

Indexed as

HistonesSaccharomyces cerevisiaeAnimalsHistone CodeMammalsProtein Processing, Post-TranslationalHistoneschromatinfungal pathogenshistone-modifying enzymeshistonespost-translational modificationprotein extractionyeast

Identifiers

PMID37463329
PMCPMC10408643
OpenAlexW4384664478

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.