Evidence map›Paper›PMID 37463106›Full record

ArticleCell reports2023

SMYD3 represses tumor-intrinsic interferon response in HPV-negative squamous cell carcinoma of the head and neck.

Nupur Nigam, Benjamin Bernard, Samantha Sevilla, Sohyoung Kim, Mohd Saleem Dar, Daniel Tsai, Yvette Robbins, Kyunghee Burkitt, Cem Sievers, Clint T Allen and 28 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 24 citations in OpenAlex.

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  17. The Roles of H3K9me3 Writers, Readers, and Erasers in Cancer Immunotherapy.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors at 11 institutions in 2 countries.

Nupur NigamThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Benjamin BernardThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Samantha SevillaCollaborative Bioinformatics Resource, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA; Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Sohyoung KimLaboratory of Receptor Biology and Gene Expression, NCI, NIH, Bethesda, MD 20892, USA.
Mohd Saleem DarThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Daniel TsaiThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Yvette RobbinsTranslational Tumor Immunology Program, NIDCD, NIH, Bethesda, MD 20892, USA.
Kyunghee BurkittThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Cem SieversTranslational Tumor Immunology Program, NIDCD, NIH, Bethesda, MD 20892, USA.
Clint T AllenTranslational Tumor Immunology Program, NIDCD, NIH, Bethesda, MD 20892, USA.
Richard L BennettUniversity of Florida Cancer Center, Gainesville, FL 32610, USA.
Theophilus T TetteyLaboratory of Receptor Biology and Gene Expression, NCI, NIH, Bethesda, MD 20892, USA.
Benjamin CarterNational Heart, Lung and Blood Institute, NIH, Bethesda, MD 20892, USA.
Lorenzo RinaldiLaboratory of Receptor Biology and Gene Expression, NCI, NIH, Bethesda, MD 20892, USA.
Mark W LingenUniversity of Chicago, Department of Pathology, Chicago, IL 60637, USA.
Houssein SaterGU Malignancies Branch, NCI, NIH, Bethesda, MD 20892, USA.
Elijah F EdmondsonMolecular Histopathology Laboratory, Frederick National Laboratory for Cancer Research, NIH, Frederick, MD 21702, USA.
Arfa MoshiriThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Abbas SaeedThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Hui ChengNational Institute of Deafness and Other Communication Disorders, NIH, Bethesda, MD 20892, USA.
Xiaolin LuoIonis Pharmaceuticals, Carlsbad, CA 92010, USA.
Kevin BrennanDepartment of Otolaryngology - Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305, USA.
Vishal KopardeCollaborative Bioinformatics Resource, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA; Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Chen ChenDepartment of Otolaryngology - Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305, USA.
Sudipto DasProtein Characterization Laboratory, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc, Frederick, MD 21702, USA.
Thorkell AndressonProtein Characterization Laboratory, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Leidos Biomedical Research, Inc, Frederick, MD 21702, USA.
Abdalla AbdelmaksoudCollaborative Bioinformatics Resource, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA; Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD 21702, USA.
Madhavi MuraliThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA.
Seiji SakataPathology Project for Molecular Targets, Cancer Institute, Japanese Foundation for Cancer Research, Tokyo 135-0063, Japan; Division of Pathology, Cancer Institute, Japanese Foundation for Cancer Research, Tokyo 135-0063, Japan.
Kengo TakeuchiPathology Project for Molecular Targets, Cancer Institute, Japanese Foundation for Cancer Research, Tokyo 135-0063, Japan; Division of Pathology, Cancer Institute, Japanese Foundation for Cancer Research, Tokyo 135-0063, Japan; Department of Pathology, Cancer Institute Hospital, Japanese Foundation for Cancer Research, Tokyo 135-0063, Japan.
Raj ChariGenome Modification Core, Laboratory Animal Sciences Program, Frederick National Lab for Cancer Research, Frederick, MD 21702, USA.
Yusuke NakamuraCancer Precision Medicine Center, Japanese Foundation for Cancer Research, Tokyo 135-0063, Japan.
Ravindra UppaluriDana Farber Cancer Institute, Boston, MA 02215, USA.
John B SunwooDepartment of Otolaryngology - Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305, USA.
Carter Van WaesNational Institute of Deafness and Other Communication Disorders, NIH, Bethesda, MD 20892, USA.
Jonathan D LichtUniversity of Florida Cancer Center, Gainesville, FL 32610, USA.
Gordon L HagerLaboratory of Receptor Biology and Gene Expression, NCI, NIH, Bethesda, MD 20892, USA.
Vassiliki SalouraThoracic and GI Malignancies Branch, Center for Cancer Research, NCI, NIH, Bethesda, MD 20892, USA. Electronic address: vassiliki.saloura@nih.gov.
Center for Cancer Research · USNational Institute on Deafness and Other Communication Disorders · USFrederick National Laboratory for Cancer Research · USJapanese Foundation For Cancer Research · JPStanford University · USLeidos Biomedical Research Inc. (United States)University of Florida Health · USDana-Farber Cancer Institute · USIonis Pharmaceuticals (United States) · USNational Heart Lung and Blood Institute · USUniversity of Chicago · US

Funding

Chromatin Structure and Gene ExpressionZIABC005450 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI HAGER, GORDON L · 2009 to 2025
$35.2M
The Role of WHSC1L1 in Squamous Cell Carcinoma of the Head and NeckZIABC011831 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SALOURA, VASSILIKI · 2018 to 2025
$7.6M
Intramural NIH HHS ZIA BC011831NCI NIH HHS HHSN261201500003CNCI NIH HHS HHSN261201500003I
6 · The paper itself

Abstract

Cancers often display immune escape, but the mechanisms are incompletely understood. Herein, we identify SMYD3 as a mediator of immune escape in human papilloma virus (HPV)-negative head and neck squamous cell carcinoma (HNSCC), an aggressive disease with poor response to immunotherapy with pembrolizumab. SMYD3 depletion induces upregulation of multiple type I interferon (IFN) response and antigen presentation machinery genes in HNSCC cells. Mechanistically, SMYD3 binds to and regulates the transcription of UHRF1, encoding for a reader of H3K9me3, which binds to H3K9me3-enriched promoters of key immune-related genes, recruits DNMT1, and silences their expression. SMYD3 further maintains the repression of immune-related genes through intragenic deposition of H4K20me3. In vivo, Smyd3 depletion induces influx of CD8

Indexed as

Head and Neck NeoplasmsHistone-Lysine N-MethyltransferaseInterferon Type IPapillomavirus InfectionsSquamous Cell Carcinoma of Head and NeckCCAAT-Enhancer-Binding ProteinsCD8-Positive T-LymphocytesHumansUbiquitin-Protein LigasesCCAAT-Enhancer-Binding ProteinsHistone-Lysine N-MethyltransferaseInterferon Type ISMYD3 protein, humanUbiquitin-Protein LigasesUHRF1 protein, humanantitumor immune responseCP: CancerCP: Immunologyhead and neck cancerinterferon responseSMYD3

Identifiers

PMID37463106
PMCPMC10407766
OpenAlexW4384563886

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.