Evidence map›Paper›PMID 37463053›Full record

ArticleJCI insight2023

Circadian regulation of lung repair and regeneration.

Amruta Naik, Kaitlyn M Forrest, Oindrila Paul, Yasmine Issah, Utham K Valekunja, Soon Y Tang, Akhilesh B Reddy, Elizabeth J Hennessy, Thomas G Brooks, Fatima Chaudhry and 10 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in JCI insight, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Circadian IOP Rhythm in Rats Is Driven by Neural Signals From the Brain.Investigative ophthalmology & visual science · 2026
    Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Circadian rhythms in solid organ transplantation.The Journal of heart and lung transplantation : the official publication of the International Society for Heart Transplantation · 2024
    Review
  14. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 1 country.

Amruta NaikChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Kaitlyn M ForrestChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Oindrila PaulChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Yasmine IssahChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Utham K ValekunjaSystems Pharmacology, Perelman School of Medicine, Philadelphia, Pennsylvania, USA.
Soon Y TangInstitute of Translational Medicine and Therapeutics (ITMAT), and.
Akhilesh B ReddySystems Pharmacology, Perelman School of Medicine, Philadelphia, Pennsylvania, USA.
Elizabeth J HennessyInstitute of Translational Medicine and Therapeutics (ITMAT), and.
Thomas G BrooksInstitute of Translational Medicine and Therapeutics (ITMAT), and.
Fatima ChaudhryChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Apoorva BabuPenn-CHOP Lung Biology Institute.
Michael MorleyPenn-CHOP Lung Biology Institute.
Jarod A ZeppDepartment of Pediatrics.
Gregory R GrantInstitute of Translational Medicine and Therapeutics (ITMAT), and.
Garret A FitzGeraldSystems Pharmacology, Perelman School of Medicine, Philadelphia, Pennsylvania, USA.
Amita SehgalInstitute of Translational Medicine and Therapeutics (ITMAT), and.
G Scott WorthenChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
David B FrankChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Edward E MorriseyPenn-CHOP Lung Biology Institute.
Shaon SenguptaChildren's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Children's Hospital of Philadelphia · USTranslational Therapeutics (United States) · USLung Institute · USUniversity of Pennsylvania · US

Funding

Phenotypic Diversity in COVID-19UL1TR001878 · NCATS · UNIVERSITY OF PENNSYLVANIA · PI FITZGERALD, GARRET A · 2016 to 2025
$102.4M
Genetic Investigation of Covid 19 in Lung DiseaseR01HL164929 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MARK L KAHN, EDWARD E MORRISEY · 2022 to 2026
$4.7M
Molecular pathways controlling alveolar epithelial remodeling in development and regenerationR01HL132999 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2016 to 2023
$4.6M
Determination of the mechanistic targets of metforminDP1DK126167 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI REDDY, AKHILESH BASI · 2020 to 2024
$3.9M
Mechanistic evaluation of the role of circadian rhythms in acute lung injury and subsequent recoveryR01HL155934 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI SENGUPTA, SHAON · 2021 to 2025
$2.9M
Regulation of neonatal inflammation by myeloid-derived suppressor cellsR01HL147472 · NHLBI · WISTAR INSTITUTE · PI NEFEDOVA, YULIA · 2020 to 2023
$2.5M
Transcriptional Regulation of Lung Alveolar RegenerationR01HL152194 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI MORRISEY, EDWARD E · 2021 to 2024
$2.3M
Lung repair mechanisms mediated by the immune-fibroblast interfaceR35GM146835 · NIGMS · CHILDREN'S HOSP OF PHILADELPHIA · PI Jarod Zepp · 2022 to 2026
$2.2M
Mechanistic Basis of Circadian Clocks in Bmal1 Knockout MiceR01GM139211 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI REDDY, AKHILESH BASI · 2021 to 2024
$2.1M
Wnt-mediated epithelial-endothelial crosstalk in the generation and regeneration of the lung alveolusK08HL140129 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI FRANK, DAVID BRIAN · 2018 to 2022
$797k
Defining the molecular determinants of mesenchymal lineage allocation in lung development and diseaseR00HL141684 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI ZEPP, JAROD · 2020 to 2022
$747k
Role of Circadian Clock in Lung InflammationK08HL132053 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI SENGUPTA, SHAON · 2017 to 2020
$638k
NCATS NIH HHS UL1 TR001878NHLBI NIH HHS K08 HL132053NHLBI NIH HHS K08 HL140129NHLBI NIH HHS R00 HL141684NHLBI NIH HHS R01 HL132999NHLBI NIH HHS R01 HL147472NHLBI NIH HHS R01 HL152194NHLBI NIH HHS R01 HL155934NHLBI NIH HHS R01 HL164929NIDDK NIH HHS DP1 DK126167NIGMS NIH HHS R01 GM139211NIGMS NIH HHS R35 GM146835
6 · The paper itself

Abstract

Optimal lung repair and regeneration are essential for recovery from viral infections, including influenza A virus (IAV). We have previously demonstrated that acute inflammation and mortality induced by IAV is under circadian control. However, it is not known whether the influence of the circadian clock persists beyond the acute outcomes. Here, we utilize the UK Biobank to demonstrate an association between poor circadian rhythms and morbidity from lower respiratory tract infections, including the need for hospitalization and mortality after discharge; this persists even after adjusting for common confounding factors. Furthermore, we use a combination of lung organoid assays, single-cell RNA sequencing, and IAV infection in different models of clock disruption to investigate the role of the circadian clock in lung repair and regeneration. We show that lung organoids have a functional circadian clock and the disruption of this clock impairs regenerative capacity. Finally, we find that the circadian clock acts through distinct pathways in mediating lung regeneration - in tracheal cells via the Wnt/β-catenin pathway and through IL-1β in alveolar epithelial cells. We speculate that adding a circadian dimension to the critical process of lung repair and regeneration will lead to novel therapies and improve outcomes.

Indexed as

Circadian ClocksInfluenza A virusAlveolar Epithelial CellsCircadian RhythmLungRegenerationInfluenzaMouse modelsPulmonologyRespirationVirology

Identifiers

PMID37463053
PMCPMC10543710
OpenAlexW4384626236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.