Evidence map›Paper›PMID 37463049›Full record

ArticleThe Journal of clinical investigation2023

The latent reservoir of inducible, infectious HIV-1 does not decrease despite decades of antiretroviral therapy.

Natalie F McMyn, Joseph Varriale, Emily J Fray, Carolin Zitzmann, Hannah MacLeod, Jun Lai, Anushka Singhal, Milica Moskovljevic, Mauro A Garcia, Brianna M Lopez and 16 more

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 105 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
105citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

105 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Trial
  5. Trial
  6. Article
  7. The immunophenotype and proviral landscape of HIV-infected CD4 T cells during antiretroviral therapy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. HCV-specific CD4EBioMedicine · 2026
    Article
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  11. Review
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45 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Natalie F McMynJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Joseph VarrialeJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Emily J FrayJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Carolin ZitzmannLos Alamos National Laboratory, Los Alamos, New Mexico, USA.
Hannah MacLeodAccelevirDx, Baltimore, Maryland, USA.
Jun LaiJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Anushka SinghalJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Milica MoskovljevicJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Mauro A GarciaJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Brianna M LopezJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Vivek HariharanJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Kyle RhodehouseJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Kenneth LynnThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Pablo TebasUniversity of Pennsylvania, Philadelphia, Pennsylvania, USA.
Karam MounzerPhiladelphia Field Initiating Group for HIV-1 Trials, Philadelphia, Pennsylvania, USA.
Luis J MontanerThe Wistar Institute, Philadelphia, Pennsylvania, USA.
Erika BenkoMaple Leaf Medical Clinic, Toronto, Ontario, Canada.
Colin KovacsMaple Leaf Medical Clinic, Toronto, Ontario, Canada.
Rebecca HohUCSF, San Francisco, California, USA.
Francesco R SimonettiJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Gregory M LairdAccelevirDx, Baltimore, Maryland, USA.
Steven G DeeksUCSF, San Francisco, California, USA.
Ruy M RibeiroLos Alamos National Laboratory, Los Alamos, New Mexico, USA.
Alan S PerelsonLos Alamos National Laboratory, Los Alamos, New Mexico, USA.
Robert F SilicianoJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Janet M SilicianoJohns Hopkins University School of Medicine, Baltimore, Maryland, USA.

Funding

Vaccine Response and Immunotherapeutics SWGP30AI094189 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Anna Palmer Durbin · 2012 to 2026
$67.0M
Pediatric Adolescent Virus Elimination (PAVE) Martin Delaney CollaboratoryUM1AI164566 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Ann M Chahroudi, Deborah Persaud · 2021 to 2026
$35.5M
BEAT-HIV: Delaney Collaboratory to Cure HIV-1 Infection by Combination ImmunotherapyUM1AI164570 · NIAID · WISTAR INSTITUTE · PI Luis J Montaner, James L. Riley · 2021 to 2026
$34.7M
Delaney AIDS Research Enterprise to Cure HIVUM1AI164560 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS, Sharon Ruth Lewin · 2021 to 2026
$32.0M
Reversing Immune Dysfunction for HIV-1 EradicationUM1AI164561 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI SUMIT K CHANDA, Paula M Cannon · 2021 to 2026
$30.0M
I4C 2.0: Immunotherapy for CureUM1AI164556 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI Dan H. Barouch, John W Mellors · 2021 to 2026
$28.0M
First-in-human study of two anti-SARS CoV-2 antibodies in health volunteersUM1AI126620 · NIAID · WISTAR INSTITUTE · PI MONTANER, LUIS J, RILEY, JAMES L. · 2016 to 2021
$24.5M
Understanding reservoir dynamics through analysis of viral decay processesP01AI169615 · NIAID · JOHNS HOPKINS UNIVERSITY · PI ROBERT F SILICIANO · 2022 to 2026
$9.5M
Modeling Viral and T Lymphocyte DynamicsR01OD011095 · OD · TRIAD NATIONAL SECURITY, LLC · PI PERELSON, ALAN S · 2012 to 2024
$5.0M
Centralized Resource to Accurately Quantify Latent and Expressed HIV ReservoirsU24AI143502 · NIAID · ACCELEVIR DIAGNOSTICS, LLC · PI LAIRD, GREGORY MICHAEL, MARTIN, ALBINE · 2020 to 2024
$4.9M
Immune System Modeling/HIVR01AI028433 · NIAID · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI PERELSON, ALAN S · 1990 to 2021
$3.7M
Pharmacology and Molecular Sciences Training Program: Enhancing Inclusivity Through Universal Design for Learning in Graduate CoursesT32GM135083 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Caren L. Freel Meyers · 2020 to 2026
$3.3M
Howard Hughes Medical InstituteNIAID NIH HHS P01 AI169615NIAID NIH HHS P30 AI094189NIAID NIH HHS R01 AI028433NIAID NIH HHS R01 AI152703NIAID NIH HHS U01 AI186993NIAID NIH HHS U24 AI143502NIAID NIH HHS UM1 AI126620NIAID NIH HHS UM1 AI164556NIAID NIH HHS UM1 AI164560NIAID NIH HHS UM1 AI164561NIAID NIH HHS UM1 AI164566NIAID NIH HHS UM1 AI164570NIGMS NIH HHS T32 GM135083NIH HHS DP5 OD031834NIH HHS R01 OD011095
6 · The paper itself

Abstract

HIV-1 persists in a latent reservoir in resting CD4+ T cells despite antiretroviral therapy (ART). The reservoir decays slowly over the first 7 years of ART (t1/2 = 44 months). However, whether decay continues with long-term ART is unclear. Recent integration site studies indicate gradual selection against inducible, intact proviruses, raising speculation that decades of ART might allow treatment interruption without viral rebound. Therefore, we measured the reservoir in 42 people on long-term ART (mean 22 years) using a quantitative viral outgrowth assay. After 7 years of ART, there was no long-term decrease in the frequency of inducible, replication-competent proviruses but rather an increase with an estimated doubling time of 23 years. Another reservoir assay, the intact proviral DNA assay, confirmed that reservoir decay with t1/2 of 44 months did not continue with long-term ART. The lack of decay reflected proliferation of infected cells. Most inducible, replication-competent viruses (79.8%) had env sequences identical to those of other isolates from the same sample. Thus, although integration site analysis indicates changes in reservoir composition, the proliferation of CD4+ T cells counteracts decay, maintaining the frequency of inducible, replication-competent proviruses at roughly constant levels over the long term. These results reinforce the need for lifelong ART.

Indexed as

HIV-1HIV InfectionsAnti-Retroviral AgentsCD4-Positive T-LymphocytesHumansProvirusesViral LoadVirus LatencyVirus ReplicationAnti-Retroviral AgentsAIDS/HIVMolecular biologyT cellsVirology

Identifiers

PMID37463049
PMCPMC10471168

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.