Evidence map›Paper›PMID 37462077›Full record

ArticleNucleic acids research2023

DeSUMOylation of chromatin-bound proteins limits the rapid transcriptional reprogramming induced by daunorubicin in acute myeloid leukemias.

Mathias Boulanger, Mays Aqrouq, Denis Tempé, Chamseddine Kifagi, Marko Ristic, Dana Akl, Rawan Hallal, Aude Carusi, Ludovic Gabellier, Marion de Toledo and 12 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 3 countries.

Mathias BoulangerIGMM, Univ. Montpellier, CNRS, Montpellier, France.ORCID 0000-0002-2799-4047
Mays AqrouqIGMM, Univ. Montpellier, CNRS, Montpellier, France.ORCID 0009-0000-6024-4275
Denis TempéIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Chamseddine KifagiIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Marko RisticIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Dana AklIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Rawan HallalIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Aude CarusiIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Ludovic GabellierIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Marion de ToledoIGMM, Univ. Montpellier, CNRS, Montpellier, France.ORCID 0000-0002-7638-0041
Jon-Otti SigurdssonProteomics Program, Novo Nordisk Foundation Center For Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark.
Tony KaomaGenomics Research Unit, Luxembourg Institute of Health, 84, Val Fleuri, L-1526 Luxembourg, Luxembourg.
Charlotte Andrieu-SolerIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Thierry FornéIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Eric SolerIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Yosr HicheriService d'Hématologie Clinique, CHU de Montpellier, 80 Avenue Augustin Fliche, 34091 Montpellier, France.
Elise GueretMGX-Montpellier GenomiX, Univ. Montpellier, CNRS, INSERM, Montpellier, France.
Laurent VallarGenomics Research Unit, Luxembourg Institute of Health, 84, Val Fleuri, L-1526 Luxembourg, Luxembourg.
Jesper V OlsenProteomics Program, Novo Nordisk Foundation Center For Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark.
Guillaume CartronIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Marc PiechaczykIGMM, Univ. Montpellier, CNRS, Montpellier, France.
Guillaume BossisIGMM, Univ. Montpellier, CNRS, Montpellier, France.ORCID 0000-0002-3349-8250
Centre National de la Recherche Scientifique · FRLuxembourg Institute of Health · LUUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genotoxicants have been used for decades as front-line therapies against cancer on the basis of their DNA-damaging actions. However, some of their non-DNA-damaging effects are also instrumental for killing dividing cells. We report here that the anthracycline Daunorubicin (DNR), one of the main drugs used to treat Acute Myeloid Leukemia (AML), induces rapid (3 h) and broad transcriptional changes in AML cells. The regulated genes are particularly enriched in genes controlling cell proliferation and death, as well as inflammation and immunity. These transcriptional changes are preceded by DNR-dependent deSUMOylation of chromatin proteins, in particular at active promoters and enhancers. Surprisingly, inhibition of SUMOylation with ML-792 (SUMO E1 inhibitor), dampens DNR-induced transcriptional reprogramming. Quantitative proteomics shows that the proteins deSUMOylated in response to DNR are mostly transcription factors, transcriptional co-regulators and chromatin organizers. Among them, the CCCTC-binding factor CTCF is highly enriched at SUMO-binding sites found in cis-regulatory regions. This is notably the case at the promoter of the DNR-induced NFKB2 gene. DNR leads to a reconfiguration of chromatin loops engaging CTCF- and SUMO-bound NFKB2 promoter with a distal cis-regulatory region and inhibition of SUMOylation with ML-792 prevents these changes.

Indexed as

DaunorubicinLeukemia, Myeloid, AcuteChromatinEstersHumansPyrazolesPyrimidinesSulfonic AcidsChromatinDaunorubicinEstersML-792PyrazolesPyrimidinesSulfonic Acids

Identifiers

PMID37462077
PMCPMC10484680
OpenAlexW4384627285

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.