Evidence map›Paper›PMID 37460700›Full record

ArticleScientific reports2023

Shoot gravitropism and organ straightening cooperate to arrive at a mechanically favorable shape in Arabidopsis.

Satoru Tsugawa, Yuzuki Miyake, Keishi Okamoto, Masatsugu Toyota, Hiroki Yagi, Miyo Terao Morita, Ikuko Hara-Nishimura, Taku Demura, Haruko Ueda

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Quantitative analysis of the root posture ofQuantitative plant biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 2 countries.

Satoru TsugawaDepartment of Mechanical Engineering, Faculty of Systems Science and Technology, Akita Prefectural University, Yurihonjo, Akita, 015-0055, Japan. tsugawa@akita-pu.ac.jp.
Yuzuki MiyakeGraduate School of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan.
Keishi OkamotoGraduate School of Science, Kyoto University, Kyoto, 606-8502, Japan.
Masatsugu ToyotaDepartment of Biochemistry and Molecular Biology, Saitama University, Saitama, 338-8570, Japan.
Hiroki YagiGraduate School of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan.
Miyo Terao MoritaDivision of Plant Environmental Responses, National Institute for Basic Biology, Okazaki, 444-8585, Japan.
Ikuko Hara-NishimuraGraduate School of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan.
Taku DemuraCenter for Digital Green-innovation, Nara Institute of Science and Technology, Ikoma, Nara, 630-0192, Japan.
Haruko UedaGraduate School of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan. hueda@konan-u.ac.jp.
Konan University · JPAkita Prefectural University · JPNara Institute of Science and Technology · JPNational Institute for Basic Biology · JPOsaka Kyoiku University · JPUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Gravitropism is the plant organ bending in response to gravity, while a straightening mechanism prevents bending beyond the gravitropic set-point angle. The promotion and prevention of bending occur simultaneously around the inflorescence stem tip. How these two opposing forces work together and what part of the stem they affect are unknown. To understand the mechanical forces involved, we rotated wild type and organ-straightening-deficient mutant (myosin xif xik) Arabidopsis plants to a horizontal position to initiate bending. The mutant stems started to bend before the wild-type stems, which led us to hypothesize that the force preventing bending was weaker in mutant. We modeled the wild-type and mutant stems as elastic rods, and evaluated two parameters: an organ-angle-dependent gravitropic-responsive parameter (β) and an organ-curvature-dependent proprioceptive-responsive parameter (γ). Our model showed that these two parameters were lower in mutant than in wild type, implying that, unexpectedly, both promotion and prevention of bending are weak in mutant. Subsequently, finite element method simulations revealed that the compressive stress in the middle of the stem was significantly lower in wild type than in mutant. The results of this study show that myosin-XIk-and-XIf-dependent organ straightening adjusts the stress distribution to achieve a mechanically favorable shape.

Indexed as

ArabidopsisArabidopsis ProteinsGravitationGravitropismMutationMyosinsArabidopsis ProteinsMyosins

Identifiers

PMID37460700
PMCPMC10352312
OpenAlexW4384558909

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.