Evidence map›Paper›PMID 37460697›Full record

ArticleNature cell biology2023

H3K36 methylation maintains cell identity by regulating opposing lineage programmes.

Michael S Hoetker, Masaki Yagi, Bruno Di Stefano, Justin Langerman, Simona Cristea, Lai Ping Wong, Aaron J Huebner, Jocelyn Charlton, Weixian Deng, Chuck Haggerty and 5 more

Open access · greenAbstract read
In one paragraph

Article in Nature cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 38 citations in OpenAlex.

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  16. Engineered histones reshape chromatin in human cells.bioRxiv : the preprint server for biology · 2025
    Article
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  18. Review
  19. Review
  20. Oncotarget · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 2 countries.

Michael S HoetkerDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.ORCID 0000-0001-8784-8263
Masaki YagiDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Bruno Di StefanoDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.ORCID 0000-0003-2532-3087
Justin LangermanDavid Geffen School of Medicine, Department of Biological Chemistry, Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, Jonsson Comprehensive Cancer Center, Molecular Biology Institute, University of California Los Angeles, Los Angeles, CA, USA.
Simona CristeaDepartment of Data Science, Dana-Farber Cancer Institute, Boston, MA, USA.
Lai Ping WongDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Aaron J HuebnerDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Jocelyn CharltonDepartment of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, USA.
Weixian DengDavid Geffen School of Medicine, Department of Biological Chemistry, Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, Jonsson Comprehensive Cancer Center, Molecular Biology Institute, University of California Los Angeles, Los Angeles, CA, USA.
Chuck HaggertyDepartment of Genome Regulation, Max-Planck Institute for Molecular Genetics, Berlin, Germany.
Ruslan I SadreyevDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA.
Alexander MeissnerHarvard Stem Cell Institute, Cambridge, MA, USA.ORCID 0000-0001-8646-7469
Franziska MichorBroad Institute of MIT and Harvard, Cambridge, MA, USA.ORCID 0000-0003-4869-8842
Kathrin PlathDavid Geffen School of Medicine, Department of Biological Chemistry, Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, Jonsson Comprehensive Cancer Center, Molecular Biology Institute, University of California Los Angeles, Los Angeles, CA, USA.ORCID 0000-0001-7796-3372
Konrad HochedlingerDepartment of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA. hochedlinger@molbio.mgh.harvard.edu.ORCID 0000-0001-5811-5386
Broad Institute · USHarvard University · USUniversity of California, Los Angeles · USMassachusetts General Hospital · USMax Planck Institute for Molecular Genetics · DE

Funding

Roles of sumoylation and alternative polyadenylation in cellular reprogrammingP01GM099134 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PLATH, KATHRIN · 2011 to 2021
$20.3M
Project 3: Single Cell Measures of Intratumor Diversity for Optimal Breast Cancer TherapyU54CA193461 · NCI · DANA-FARBER CANCER INST · PI MICHOR, FRANZISKA · 2015 to 2020
$11.2M
Transcription Factor Induced ReprogrammingR01HD058013 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI HOCHEDLINGER, KONRAD · 2010 to 2019
$4.4M
Dissecting mechanistic links between MAPK signaling, genomic hypomethylation and naive pluripotencyR01HD103612 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI HOCHEDLINGER, KONRAD · 2021 to 2025
$2.6M
Investigating the direct reprogramming of fibroblasts into skeletal muscle progenitorsR01AR077695 · NIAMS · MASSACHUSETTS GENERAL HOSPITAL · PI HOCHEDLINGER, KONRAD · 2020 to 2024
$2.2M
NCI NIH HHS U54 CA193461NIAMS NIH HHS R01 AR077695NICHD NIH HHS R01 HD058013NICHD NIH HHS R01 HD103612NIGMS NIH HHS P01 GM099134
6 · The paper itself

Abstract

The epigenetic mechanisms that maintain differentiated cell states remain incompletely understood. Here we employed histone mutants to uncover a crucial role for H3K36 methylation in the maintenance of cell identities across diverse developmental contexts. Focusing on the experimental induction of pluripotency, we show that H3K36M-mediated depletion of H3K36 methylation endows fibroblasts with a plastic state poised to acquire pluripotency in nearly all cells. At a cellular level, H3K36M facilitates epithelial plasticity by rendering fibroblasts insensitive to TGFβ signals. At a molecular level, H3K36M enables the decommissioning of mesenchymal enhancers and the parallel activation of epithelial/stem cell enhancers. This enhancer rewiring is Tet dependent and redirects Sox2 from promiscuous somatic to pluripotency targets. Our findings reveal a previously unappreciated dual role for H3K36 methylation in the maintenance of cell identity by integrating a crucial developmental pathway into sustained expression of cell-type-specific programmes, and by opposing the expression of alternative lineage programmes through enhancer methylation.

Indexed as

Epigenesis, GeneticHistonesCell DifferentiationCell LineageFibroblastsMethylationHistones

Identifiers

PMID37460697
PMCPMC10896483
OpenAlexW4384522416

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.