Evidence map›Paper›PMID 37460671›Full record

ArticleThe pharmacogenomics journal2023

HLA-DQA1*05 and upstream variants of PPARGC1B are associated with infliximab persistence in Japanese Crohn's disease patients.

Fumiko Shimoda, Takeo Naito, Yoichi Kakuta, Yosuke Kawai, Katsushi Tokunaga, NCBN Controls WGS Consortium, Yusuke Shimoyama, Rintaro Moroi, Hisashi Shiga, Masao Nagasaki and 2 more

Abstract read
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In one paragraph

Article in The pharmacogenomics journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Pharmacogenomics of TNF inhibitors.Frontiers in immunology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 1 country.

Fumiko ShimodaDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Takeo NaitoDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan. takeo.naito.b3@tohoku.ac.jp.ORCID 0000-0002-6249-2536
Yoichi KakutaDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.ORCID 0000-0002-7042-009X
Yosuke KawaiGenome Medical Science Project, National Center for Global Health and Medicine, Tokyo, Japan.ORCID 0000-0003-0666-1224
Katsushi TokunagaGenome Medical Science Project, National Center for Global Health and Medicine, Tokyo, Japan.ORCID 0000-0001-5501-0503
NCBN Controls WGS Consortium
Yusuke ShimoyamaDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Rintaro MoroiDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Hisashi ShigaDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
Masao NagasakiDivision of Biomedical Information Analysis, Medical Research Center for High Depth Omics, Medical Institute of Bioregulation, Kyushu University, Fukuoka, Japan.ORCID 0000-0002-4292-8785
Yoshitaka KinouchiStudent Health Care Center, Institute for Excellence in Higher Education, Tohoku University, Sendai, Japan.
Atsushi MasamuneDivision of Gastroenterology, Tohoku University Graduate School of Medicine, Sendai, Japan.
National Center for Global Health and Medicine · JPTohoku University · JPNational Center of Neurology and Psychiatry · JPBioBank Japan · JPNational Center For Child Health and Development · JPNational Center for Geriatrics and Gerontology · JPNational Cerebral and Cardiovascular Center · JPKyushu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, the HLA-DQA1*05 (rs2097432) genetic variation has been reported to be linked to early infliximab (IFX) treatment failure in the Caucasian Crohn's disease (CD) population, but that evidence is scarce in the Asian population. This study aimed to investigate the relationship between rs2097432 and the cumulative discontinuation-free time of IFX (IFX persistence) in 189 Japanese biologics-naive CD patients. We also performed a genome-wide association study (GWAS) to discover novel genetic predictors for IFX persistence. The C allele of rs2097432 significantly increased the risk of early discontinuation of IFX [Hazard ratio (HR) = 2.23 and P-value = 0.026]. In GWAS, one locus tagged by rs73277969, located upstream of PPARGC1B which attenuates macrophage-mediated inflammation, reached genome-wide significance (HR = 6.04 and P-value = 7.93E-9). Pathway analysis suggested association of signaling by PDGF and FCGR activation signaling with IFX persistence (P-value = 8.56E-5 and 5.80E-4, respectively).

Indexed as

Crohn DiseaseHLA-DQ alpha-ChainsInfliximabRNA-Binding ProteinsEast Asian PeopleGastrointestinal AgentsGenome-Wide Association StudyHumansRetrospective StudiesTreatment OutcomeGastrointestinal AgentsHLA-DQA1 antigenHLA-DQ alpha-ChainsInfliximabPPARGC1B protein, humanRNA-Binding Proteins

Identifiers

PMID37460671
OpenAlexW4384560030

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.