Evidence map›Paper›PMID 37455743›Full record

ArticleFrontiers in microbiology2023

Whole genome analysis and antimicrobial resistance of

Bright Agbodzi, Samuel Duodu, Helena Dela, Selassie Kumordjie, Clara Yeboah, Eric Behene, Karen Ocansey, Jennifer N Yanney, George Boateng-Sarfo, Samuel Kojo Kwofie and 9 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Phenotypic and genotypic characterization ofJAC-antimicrobial resistance · 2026
    Article
  3. Article
  4. Article
  5. Microorganisms · 2025
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 2 countries.

Bright AgbodziNaval Medical Research Unit No. 3, Accra, Ghana.
Samuel DuoduWest African Centre for Cell Biology of Infectious Pathogens, College of Basic and Applied Sciences, University of Ghana, Accra, Ghana.
Helena DelaNaval Medical Research Unit No. 3, Accra, Ghana.
Selassie KumordjieNaval Medical Research Unit No. 3, Accra, Ghana.
Clara YeboahNaval Medical Research Unit No. 3, Accra, Ghana.
Eric BeheneNaval Medical Research Unit No. 3, Accra, Ghana.
Karen OcanseyNaval Medical Research Unit No. 3, Accra, Ghana.
Jennifer N YanneyNaval Medical Research Unit No. 3, Accra, Ghana.
George Boateng-SarfoNaval Medical Research Unit No. 3, Accra, Ghana.
Samuel Kojo KwofieWest African Centre for Cell Biology of Infectious Pathogens, College of Basic and Applied Sciences, University of Ghana, Accra, Ghana.
Beverly EgyirBacteriology Department, Noguchi Memorial Institute for Medical Research, University of Ghana, Accra, Ghana.
Sophie M ColstonCenter for Bio/Molecular Science and Engineering, Naval Research Laboratory, Washington, DC, United States.
Hugo V MirandaNaval Medical Research Unit No. 3, Accra, Ghana.
Chaselynn WattersNaval Medical Research Unit No. 3, Accra, Ghana.
Terrel SandersNaval Medical Research Unit No. 3, Accra, Ghana.
Anne T FoxNaval Medical Research Unit No. 3, Accra, Ghana.
Andrew G LetiziaNaval Medical Research Unit No. 3, Accra, Ghana.
Michael R WileyNebraska Medical Center, Omaha, NE, United States.
Naiki AttramNaval Medical Research Unit No. 3, Accra, Ghana.
Navrongo Health Research Centre · GHUniversity of Ghana · GHNebraska Medical Center · USNoguchi Memorial Institute for Medical Research · GHUnited States Naval Research Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Gonorrhoea is a major public health concern. With the global emergence and spread of resistance to last-line antibiotic treatment options, gonorrhoea threatens to be untreatable in the future. Therefore, this study performed whole genome characterization of Methods: Whole genome sequencing (WGS) was performed on 56 isolates using both the Oxford Nanopore MinION and Illumina MiSeq sequencing platforms. The Comprehensive Antimicrobial Resistance Database (CARD) and PUBMLST.org/neisseria databases were used to catalogue chromosomal and plasmid genes implicated in AMR. The core genome multi-locus sequence typing (cgMLST) approach was used for comparative genomics analysis. Results and Discussion:

Indexed as

antimicrobial resistancecore genome MLSTGhanagonorrheaNeisseria gonorrhoeaewhole genome sequencing

Identifiers

PMID37455743
PMCPMC10339232
OpenAlexW4382725750

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.