Evidence map›Paper›PMID 37454216›Full record

ArticleNature communications2023

Loss of PHF8 induces a viral mimicry response by activating endogenous retrotransposons.

Yanan Liu, Longmiao Hu, Zhengzhen Wu, Kun Yuan, Guangliang Hong, Zhengke Lian, Juanjuan Feng, Na Li, Dali Li, Jiemin Wong and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Review
  7. Revisiting Clonal Evolution Through the Light of Retrotransposons.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. SIN3B Loss Heats up Cold Tumor Microenvironment to Boost Immunotherapy in Pancreatic Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  15. The Roles of H3K9me3 Writers, Readers, and Erasers in Cancer Immunotherapy.International journal of molecular sciences · 2024
    Review
  16. Review
  17. Article
  18. Review
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Yanan Liu *Shanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0009-0009-4300-7564
Longmiao Hu *Shanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0009-0007-8351-8807
Zhengzhen Wu *Shanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0009-0003-8110-349X
Kun YuanShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.
Guangliang HongGuangzhou Laboratory, Guangzhou, China.
Zhengke LianShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0000-0001-8010-4616
Juanjuan FengShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0000-0001-9408-6703
Na LiShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.
Dali LiShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0000-0002-0046-8493
Jiemin WongShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0000-0002-5311-842X
Jiekai ChenGuangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China.ORCID http://orcid.org/0000-0001-5168-7074
Mingyao LiuShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China.ORCID http://orcid.org/0000-0001-7339-5048
Jiangping HeGuangzhou Laboratory, Guangzhou, China. he_jiangping@gzlab.ac.cn.ORCID http://orcid.org/0000-0002-1425-3530
Xiufeng PangShanghai Key Laboratory of Regulatory Biology and School of Life Sciences, East China Normal University, Shanghai, China. xfpang@bio.ecnu.edu.cn.ORCID http://orcid.org/0000-0002-4271-8710
East China Normal University · CNChinese Academy of Sciences · CNGuangzhou Experimental Station · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunotherapy has become established as major treatment modality for multiple types of solid tumors, including colorectal cancer. Identifying novel immunotherapeutic targets to enhance anti-tumor immunity and sensitize current immune checkpoint blockade (ICB) in colorectal cancer is needed. Here we report the histone demethylase PHD finger protein 8 (PHF8, KDM7B), a Jumonji C domain-containing protein that erases repressive histone methyl marks, as an essential mediator of immune escape. Ablation the function of PHF8 abrogates tumor growth, activates anti-tumor immune memory, and augments sensitivity to ICB therapy in mouse models of colorectal cancer. Strikingly, tumor PHF8 deletion stimulates a viral mimicry response in colorectal cancer cells, where the depletion of key components of endogenous nucleic acid sensing diminishes PHF8 loss-meditated antiviral immune responses and anti-tumor effects in vivo. Mechanistically, PHF8 inhibition elicits H3K9me3-dependent retrotransposon activation by promoting proteasomal degradation of the H3K9 methyltransferase SETDB1 in a demethylase-independent manner. Moreover, PHF8 expression is anti-correlated with canonical immune signatures and antiviral immune responses in human colorectal adenocarcinoma. Overall, our study establishes PHF8 as an epigenetic checkpoint, and targeting PHF8 is a promising viral mimicry-inducing approach to enhance intrinsic anti-tumor immunity or to conquer immune resistance.

Indexed as

HistonesTranscription FactorsAnimalsHistone DemethylasesHumansMethyltransferasesMiceRetroelementsHistone DemethylasesHistonesMethyltransferasesPHF8 protein, humanPHF8 protein, mouseRetroelementsTranscription Factors

Identifiers

PMID37454216
PMCPMC10349869
OpenAlexW4384407401

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.