Evidence map›Paper›PMID 37453132›Full record

ArticleJournal of experimental botany2023

Inhibition of RNA degradation integrates the metabolic signals induced by osmotic stress into the Arabidopsis circadian system.

Putri Prasetyaningrum, Suzanne Litthauer, Franco Vegliani, Martin William Battle, Matthew William Wood, Xinmeng Liu, Cathryn Dickson, Matthew Alan Jones

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Putri PrasetyaningrumSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.
Suzanne LitthauerThe James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK.
Franco VeglianiSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.
Martin William BattleSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.
Matthew William WoodSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.
Xinmeng LiuSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.
Cathryn DicksonSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.
Matthew Alan JonesSchool of Molecular Biosciences, University of Glasgow, Glasgow G12 8QQ, UK.ORCID 0000-0002-3943-3968
University of Glasgow · GBJames Hutton Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The circadian clock system acts as an endogenous timing reference that coordinates many metabolic and physiological processes in plants. Previous studies have shown that the application of osmotic stress delays circadian rhythms via 3'-phospho-adenosine 5'-phosphate (PAP), a retrograde signalling metabolite that is produced in response to redox stress within organelles. PAP accumulation leads to the inhibition of exoribonucleases (XRNs), which are responsible for RNA degradation. Interestingly, we are now able to demonstrate that post-transcriptional processing is crucial for the circadian response to osmotic stress. Our data show that osmotic stress increases the stability of specific circadian RNAs, suggesting that RNA metabolism plays a vital role in circadian clock coordination during drought. Inactivation of XRN4 is sufficient to extend circadian rhythms as part of this response, with PRR7 and LWD1 identified as transcripts that are post-transcriptionally regulated to delay circadian progression.

Indexed as

ArabidopsisArabidopsis ProteinsCircadian ClocksCircadian RhythmGene Expression Regulation, PlantOsmotic PressureRNA StabilityArabidopsis ProteinsArabidopsiscircadiandroughtosmotic stresspost-transcriptionalRNA degradation

Identifiers

PMID37453132
PMCPMC10540740
OpenAlexW4384393711

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.