Evidence map›Paper›PMID 37452011›Full record

ArticleMolecular microbiology2023

Escherichia coli DNA repair helicase Lhr is also a uracil-DNA glycosylase.

Ryan J Buckley, Anna Lou-Hing, Karl M Hanson, Nadia R Ahmed, Christopher D O Cooper, Edward L Bolt

Open access · hybridAbstract read
In one paragraph

Article in Molecular microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ryan J BuckleySchool of Life Sciences, University of Nottingham, Nottingham, UK.
Anna Lou-HingSchool of Life Sciences, University of Nottingham, Nottingham, UK.
Karl M HansonSchool of Biological and Geographical Sciences, School of Applied Sciences, University of Huddersfield, Huddersfield, UK.
Nadia R AhmedSchool of Biological and Geographical Sciences, School of Applied Sciences, University of Huddersfield, Huddersfield, UK.
Christopher D O CooperSchool of Biological and Geographical Sciences, School of Applied Sciences, University of Huddersfield, Huddersfield, UK.ORCID 0000-0002-9197-8041
Edward L BoltSchool of Life Sciences, University of Nottingham, Nottingham, UK.ORCID 0000-0002-5656-7706
University of Huddersfield · GBUniversity of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

DNA glycosylases protect genetic fidelity during DNA replication by removing potentially mutagenic chemically damaged DNA bases. Bacterial Lhr proteins are well-characterized DNA repair helicases that are fused to additional 600-700 amino acids of unknown function, but with structural homology to SecB chaperones and AlkZ DNA glycosylases. Here, we identify that Escherichia coli Lhr is a uracil-DNA glycosylase (UDG) that depends on an active site aspartic acid residue. We show that the Lhr DNA helicase activity is functionally independent of the UDG activity, but that the helicase domains are required for fully active UDG activity. Consistent with UDG activity, deletion of lhr from the E. coli chromosome sensitized cells to oxidative stress that triggers cytosine deamination to uracil. The ability of Lhr to translocate single-stranded DNA and remove uracil bases suggests a surveillance role to seek and remove potentially mutagenic base changes during replication stress.

Indexed as

Escherichia coliUracil-DNA GlycosidaseAmino Acid SequenceBacterial ProteinsDNADNA HelicasesDNA RepairUracilBacterial ProteinsDNADNA HelicasesUracilUracil-DNA GlycosidaseDNA repairDNA replicationglycosylasehelicaseuracil

Identifiers

PMID37452011
PMCPMC10953399
OpenAlexW4384401103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.