Evidence map›Paper›PMID 37446142›Full record

ArticleInternational journal of molecular sciences2023

Search for Dispersed Repeats in Bacterial Genomes Using an Iterative Procedure.

Eugene Korotkov, Yulia Suvorova, Dimitry Kostenko, Maria Korotkova

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Regions Enriched with Reverse Complement Triplets in Bacterial Genomes.International journal of molecular sciences · 2026
    Article
  2. Study of Dispersed Repeats in theInternational journal of molecular sciences · 2024
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Eugene KorotkovInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Bld. 2, 33 Leninsky Ave., 119071 Moscow, Russia.
Yulia SuvorovaInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Bld. 2, 33 Leninsky Ave., 119071 Moscow, Russia.
Dimitry KostenkoInstitute of Bioengineering, Research Center of Biotechnology of the Russian Academy of Sciences, Bld. 2, 33 Leninsky Ave., 119071 Moscow, Russia.
Maria KorotkovaMoscow Engineering Physics Institute, National Research Nuclear University MEPhI, 31 Kashirskoye Shosse, 115409 Moscow, Russia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have developed a de novo method for the identification of dispersed repeats based on the use of random position-weight matrices (PWMs) and an iterative procedure (IP). The created algorithm (IP method) allows detection of dispersed repeats for which the average number of substitutions between any two repeats per nucleotide (

Indexed as

BacteriaEscherichia coliDNADNA, BacterialGenome, BacterialDNADNA, Bacterialbacteriadispersed repeatsdynamic programminggenomeiteration

Identifiers

PMID37446142
PMCPMC10341722

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.