Evidence map›Paper›PMID 37444642›Full record

ArticleCancers2023

Cell-Free DNA Extracted from CSF for the Molecular Diagnosis of Pediatric Embryonal Brain Tumors.

Mathieu Chicard, Yasmine Iddir, Julien Masliah Planchon, Valérie Combaret, Valéry Attignon, Alexandra Saint-Charles, Didier Frappaz, Cécile Faure-Conter, Kévin Beccaria, Pascale Varlet and 9 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 1 country.

Mathieu ChicardRecherche Translationelle en Oncologie Pédiatrique (RTOP), INSERM U830 Cancer, Heterogeneity, Instability and Plasticity, Department of Translational Research, Institut Curie Research Center, PSL Research University, 75005 Paris, France.
Yasmine IddirRecherche Translationelle en Oncologie Pédiatrique (RTOP), INSERM U830 Cancer, Heterogeneity, Instability and Plasticity, Department of Translational Research, Institut Curie Research Center, PSL Research University, 75005 Paris, France.ORCID 0000-0002-7022-0725
Julien Masliah PlanchonUnité de Génétique Somatique, Service de Génétique, Institut Curie Hospital Group, 75005 Paris, France.
Valérie CombaretPlateforme de Génomique des Cancers, Centre Léon Bérard, 69008 Lyon, France.
Valéry AttignonPlateforme de Génomique des Cancers, Centre Léon Bérard, 69008 Lyon, France.
Alexandra Saint-CharlesRecherche Translationelle en Oncologie Pédiatrique (RTOP), INSERM U830 Cancer, Heterogeneity, Instability and Plasticity, Department of Translational Research, Institut Curie Research Center, PSL Research University, 75005 Paris, France.ORCID 0000-0001-7779-7669
Didier FrappazDepartment of Pediatric Clinical Trials and Department of Pediatric Neuro-Oncology, Institut d'Hématologie et d'Oncologie Pédiatrique, 69008 Lyon, France.
Cécile Faure-ConterDepartment of Pediatric Clinical Trials and Department of Pediatric Neuro-Oncology, Institut d'Hématologie et d'Oncologie Pédiatrique, 69008 Lyon, France.ORCID 0000-0002-4717-4943
Kévin BeccariaDepartment of Pediatric Neurosurgery, Hôpital Necker-Enfants Malades, Assistance Publique Hôpitaux de Paris-Université Paris Cité, 75015 Paris, France.
Pascale VarletGHU Psychiatrie et Neurosciences, Site Sainte-Anne, 75014 Paris, France.
Birgit GeoergerDepartment of Pediatric and Adolescent Oncology, Gustave Roussy Cancer Campus, Université Paris-Saclay, 94805 Villejuif, France.ORCID 0000-0003-4361-3643
Sylvain BaulandeInstitut Curie Genomics of Excellence (ICGex) Platform, Institut Curie Research Center, 75005 Paris, France.ORCID 0000-0003-3104-1684
Gaelle PierronUnité de Génétique Somatique, Service de Génétique, Institut Curie Hospital Group, 75005 Paris, France.
Yassine BouchouchaSIREDO Integrated Pediatric Oncology Center, Institut Curie Hospital Group, 75005 Paris, France.
François DozSIREDO Integrated Pediatric Oncology Center, Institut Curie Hospital Group, 75005 Paris, France.ORCID 0000-0001-9286-4831
Olivier DelattreSIREDO Integrated Pediatric Oncology Center, Institut Curie Hospital Group, 75005 Paris, France.ORCID 0000-0002-8730-2276
Joshua J WaterfallIntegrative Functional Genomics of Cancer Laboratory, INSERM U830 Cancer, Heterogeneity, Instability and Plasticity, PSL Research University, 75005 Paris, France.
Franck BourdeautRecherche Translationelle en Oncologie Pédiatrique (RTOP), INSERM U830 Cancer, Heterogeneity, Instability and Plasticity, Department of Translational Research, Institut Curie Research Center, PSL Research University, 75005 Paris, France.
Gudrun SchleiermacherRecherche Translationelle en Oncologie Pédiatrique (RTOP), INSERM U830 Cancer, Heterogeneity, Instability and Plasticity, Department of Translational Research, Institut Curie Research Center, PSL Research University, 75005 Paris, France.ORCID 0000-0002-0133-5879
Inserm · FRInstitut Curie · FRCentre Léon Bérard · FRInstitut d’Hématologie et d’Oncologie Pédiatrique · FRHôpital Necker-Enfants Malades · FRUniversité Paris Cité · FRUniversité Paris-Saclay · FR

Funding

Agence Nationale de la Recherche ANR-10-EQPX-03 (Equipex) and ANR-10-INBS-09-08Association Enfants, Cancers et Santé NAAssociation Hubert Gouin - Enfance et Cancer NAFondation ARC pour la Recherche sur le Cancer NAFrench National Cancer Institute SiRIC Grant INCa-DGOS- 4654ITMO-Cancer Aviesan NASociété Française de lutte contre les Cancers et Les Leucémies de l'Enfant et de l'adolescent; SFCE NA
6 · The paper itself

Abstract

backgroundLiquid biopsies are revolutionary tools used to detect tumor-specific genetic alterations in body fluids, including the use of cell-free DNA (cfDNA) for molecular diagnosis in cancer patients. In brain tumors, cerebrospinal fluid (CSF) cfDNA might be more informative than plasma cfDNA. Here, we assess the use of CSF cfDNA in pediatric embryonal brain tumors (EBT) for molecular diagnosis.

methodsThe CSF cfDNA of pediatric patients with medulloblastoma (

results15/25 CSF cfDNA samples yielded informative results, with informative CNA and SNVs in 11 and 15 cases, respectively. For cases with paired tumor and CSF cfDNA WES (

conclusionCSF cfDNA sequencing yielded informative results in 60% (15/25) of all cases, with informative results in 83% (15/18) of all cases analyzed by WES. These results pave the way for the implementation of these novel approaches for molecular diagnosis and minimal residual disease monitoring.

Indexed as

cell-free DNAliquid biopsymolecular diagnosisnucleosome footprintingpediatric embryonal brain tumors

Identifiers

PMID37444642
PMCPMC10340330
OpenAlexW4383819062

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.