Evidence map›Paper›PMID 37443039›Full record

ArticleVirology journal2023

HIV-1 molecular transmission network and drug resistance in Chongqing, China, among men who have sex with men (2018-2021).

Tianyu Tan, Chongyang Bai, Rongrong Lu, Fangfang Chen, Long Li, Chao Zhou, Xu Xiang, Wei Zhang, Ling Ouyang, Jing Xu and 2 more

Abstract read
In one paragraph

Article in Virology journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Tianyu Tan *Chongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Chongyang Bai *Chongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Rongrong LuChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Fangfang ChenNational Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China.
Long LiChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Chao ZhouChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Xu XiangChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Wei ZhangChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Ling OuyangChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Jing XuChongqing Center for Disease Control and Prevention, 400042, Chongqing, China.
Houlin TangNational Center for AIDS/STD Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, 102206, China. tanghl@chinaaids.cn.
Guohui WuChongqing Center for Disease Control and Prevention, 400042, Chongqing, China. wgh68803652@163.com.

Funding

Chongqing medical scientific research project 2023MSXM113Chongqing medical scientific research project of Chongqing Health Commission and Science and Technology Bureau 2022GDRC017Chongqing Natural Science Foundation Project cstc2021jcyj-msxmX1171Chongqing Talents Program for Innovative and Entrepreneurial Pioneers cstc2021ycjh-bgzxm0097the first batch of key disciplines on public health in Chongqing YWBF2022072
6 · The paper itself

Abstract

backgroundOver the past few years, HIV transmission among men who have sex with men (MSM) in China has increased significantly. Chongqing, located in the southwest of China, has the highest prevalence of HIV among MSM in the country.

methodsBlood samples were taken from 894 MSM in Chongqing who had recently been diagnosed with HIV-1 infection and had not yet started getting treatment. In order to determine the distribution of HIV-1 subtypes, transmitted drug resistance, and assessments of molecularly transmitted clusters, we sequenced the Pol genes and employed them in phylogenetic analysis. The genetic distance between molecular clusters was 1.5%. To find potential contributing factors, logistic regression analyses were performed.

resultsOf the 894 HIV-1 pol sequences acquired from study participants, we discovered that CRF07_BC (73.6%) and CRF01_AE (19.6%) were the two most prevalent HIV-1 genotypes in Chongqing among MSM, accounting for 93.2% of all infections. In addition, CRF08_BC (1.1%), B subtype (1.0%), CRF55_01B (3.4%), and URF/Other subtypes (1.3%) were less frequently observed. Among MSM in Chongqing, transmitted drug resistance (TDR) was reported to be present at a rate of 5.6%. 48 clusters with 600 (67.1%, 600/894) sequences were found by analysis of the molecular transmission network. The distributions of people by age, sexual orientation, syphilis, and genotype were significantly differentially related to being in clusters, according to the multivariable logistic regression model.

conclusionDespite the low overall prevalence of TDR, the significance of genotypic drug resistance monitoring needs to be emphasized. CRF07_BC and CRF01_AE were the two main genotypes that created intricate molecular transmission networks. In order to prevent the expansion of molecular networks and stop the virus's spread among MSM in Chongqing, more effective HIV intervention plans should be introduced.

Indexed as

HIV-1HIV InfectionsHIV SeropositivitySexual and Gender MinoritiesChinaDrug Resistance, ViralFemaleGenotypeHomosexuality, MaleHumansMalePhylogenyChongqingDrug resistanceHIV-1 transmission networkMSM

Identifiers

PMID37443039
PMCPMC10339625

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.