Evidence map›Paper›PMID 37437030›Full record

ArticleJournal of the American Chemical Society2023

Preference of Bacterial Rhamnosyltransferases for 6-Deoxysugars Reveals a Strategy To Deplete O-Antigens.

Alexa P Harnagel, Mia Sheshova, Meng Zheng, Maggie Zheng, Karolina Skorupinska-Tudek, Ewa Swiezewska, Tania J Lupoli

Open access · hybridAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Dysregulation of a nucleotidyltransferase induces division and surface glycan defects inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Alexa P HarnagelDepartment of Chemistry, New York University, New York, New York 10003, United States.ORCID 0000-0003-4425-0039
Mia SheshovaDepartment of Chemistry, New York University, New York, New York 10003, United States.
Meng ZhengDepartment of Chemistry, New York University, New York, New York 10003, United States.
Maggie ZhengDepartment of Chemistry, New York University, New York, New York 10003, United States.
Karolina Skorupinska-TudekInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, 02-106, Poland.
Ewa SwiezewskaInstitute of Biochemistry and Biophysics, Polish Academy of Sciences, Warsaw, 02-106, Poland.
Tania J LupoliDepartment of Chemistry, New York University, New York, New York 10003, United States.ORCID 0000-0002-0989-2565
New York University · USInstitute of Biochemistry and Biophysics, Polish Academy of Sciences · PL

Funding

Probing Glycan Polymer Patterns on Bacterial Cell SurfacesR35GM142887 · NIGMS · NEW YORK UNIVERSITY · PI LUPOLI, TANIA · 2021 to 2025
$2.1M
NIGMS NIH HHS R35 GM142887
6 · The paper itself

Abstract

Bacteria synthesize hundreds of bacteria-specific or "rare" sugars that are absent in mammalian cells and enriched in 6-deoxy monosaccharides such as l-rhamnose (l-Rha). Across bacteria, l-Rha is incorporated into glycans by rhamnosyltransferases (RTs) that couple nucleotide sugar substrates (donors) to target biomolecules (acceptors). Since l-Rha is required for the biosynthesis of bacterial glycans involved in survival or host infection, RTs represent potential antibiotic or antivirulence targets. However, purified RTs and their unique bacterial sugar substrates have been difficult to obtain. Here, we use synthetic nucleotide rare sugar and glycolipid analogs to examine substrate recognition by three RTs that produce cell envelope components in diverse species, including a known pathogen. We find that bacterial RTs prefer pyrimidine nucleotide-linked 6-deoxysugars, not those containing a C6-hydroxyl, as donors. While glycolipid acceptors must contain a lipid, isoprenoid chain length, and stereochemistry can vary. Based on these observations, we demonstrate that a 6-deoxysugar transition state analog inhibits an RT

Indexed as

BacteriaO AntigensGlycolipidsNucleotidesSugarsGlycolipidsNucleotidesO AntigensSugars

Identifiers

PMID37437030
PMCPMC10375533
OpenAlexW4383988578

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.