Evidence map›Paper›PMID 37436127›Full record

ArticleCell cycle (Georgetown, Tex.)

Noncoding RNAs-based high KIF26B expression correlates with poor prognosis and tumor immune infiltration in colon cancer.

Zhihong Liu, Xin Zhou, Bo Chen, Ziyu Wu, Cuifeng Zhang, Changji Gu, Juan Li, Xiaodong Yang

Open access · hybridAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Zhihong LiuDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.ORCID 0000-0002-8532-7170
Xin ZhouDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Bo ChenNursing Department, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Ziyu WuDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Cuifeng ZhangDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Changji GuDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Juan LiDepartment of Gastroenterology, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Xiaodong YangDepartment of General Surgery, The Second Affiliated Hospital of Soochow University, Suzhou, China.ORCID 0000-0001-7685-5011
Soochow University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe protein kinesin family member 26B (KIF26B) is aberrantly expressed in various cancers. However, its particular role and association with tumor immune infiltration in colon adenocarcinoma (COAD) remain unclear.

methodsAll original data were downloaded directly from The Cancer Genome Atlas (TCGA), UCSC Xena, and Gene Expression Omnibus (GEO) databases and processed with R 3.6.3. KIF26B expression was analyzed using Oncomine, TIMER, TCGA, GEO databases, and our clinical specimens. KIF26B expression at the protein level was explored with Human Protein Atlas (HPA) database. The upstream miRNAs and lncRNAs were predicted by StarBase and validated using RT-qPCR. Correlation of KIF26B expression with the expression of immune-related or immune checkpoint genes and GSEA analysis of KIF26B-related genes were investigated via R software. Relationship of KIF26B expression with immune biomarkers or tumor immune infiltration levels was studied through GEPIA2 and TIMER databases.

resultsKIF26B was upregulated, and its overexpression was closely related to overall survival (OS), disease-specific survival (DSS), progression-free interval (PFI), T stage, N stage, and CEA levels in COAD. MIR4435-2HG/hsa-miR-500a-3p/KIF26B axis was identified as the promising regulatory pathway of KIF26B. KIF26B expression was positively correlated with immune-related genes, tumor immune infiltration, and biomarker genes of immune cells in COAD, and KIF26B-related genes were significantly enriched in macrophage activation-related pathways. Expression of immune checkpoint genes, including PDCD1, CD274, and CTLA4, was also closely related to KIF26B expression.

conclusionsOur results clarified that ncRNA-based increased KIF26B expression was associated with a worse prognosis and high tumor immune infiltration in COAD.

Indexed as

AdenocarcinomaColonic NeoplasmsMicroRNAsRNA, Long NoncodingHumansKinesinsRNA, UntranslatedKIF26B protein, humanKinesinsMicroRNAsRNA, Long NoncodingRNA, Untranslatedbiomarkersimmune cell infiltrationimmune checkpointsKIF26Bprognostic value

Identifiers

PMID37436127
PMCPMC10446804
OpenAlexW4383998639

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.