Evidence map›Paper›PMID 37435077›Full record

ArticleFrontiers in immunology2023

Expression of lymphoid structure-associated cytokine/chemokine gene transcripts in tumor and protein in serum are prognostic of melanoma patient outcomes.

Lilit Karapetyan, Hassan M AbuShukair, Aofei Li, Andrew Knight, Ayah Nedal Al Bzour, Ian P MacFawn, Zachary J Thompson, Ann Chen, Xi Yang, Rebekah Dadey and 11 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. A Review of Current and Pipeline Drugs for Treatment of Melanoma.Pharmaceuticals (Basel, Switzerland) · 2024
    Review
  7. Cancer genomics & proteomics
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Lilit KarapetyanDepartment of Cutaneous Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Hassan M AbuShukairFaculty of Medicine, Jordan University of Science and Technology, Irbid, Jordan.
Aofei LiDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Andrew KnightDepartment of Medicine, Division of General Internal Medicine, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Ayah Nedal Al BzourFaculty of Medicine, Jordan University of Science and Technology, Irbid, Jordan.
Ian P MacFawnDepartment of Immunology, University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center, Pittsburgh, PA, United States.
Zachary J ThompsonDepartment of Bioinformatics and Biostatistics, The Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Ann ChenDepartment of Bioinformatics and Biostatistics, The Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Xi YangDepartment of Medicine, Brigham and Women's Hospital and Dana Farber Cancer Institute, Boston, MA, United States.
Rebekah DadeyDepartment of Immunology, University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center, Pittsburgh, PA, United States.
Arivarasan KarunamurthyDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Danielle Vargas De StefanoDepartment of Pathology, University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Cindy SanderDepartment of Immunology, University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center, Pittsburgh, PA, United States.
Sheryl R KunningDepartment of Immunology, University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center, Pittsburgh, PA, United States.
Yana G NajjarDepartment of Medicine, Hillman Cancer Center, Division of Hematology/Oncology; University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Diwakar DavarDepartment of Medicine, Hillman Cancer Center, Division of Hematology/Oncology; University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Jason J LukeDepartment of Medicine, Hillman Cancer Center, Division of Hematology/Oncology; University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
William GoodingHillman Cancer Center Biostatistics Facility, University of Pittsburgh Medical Center Hillman Cancer Center, Pittsburgh, PA, United States.
Tullia C BrunoTumor Microenvironment Center, University of Pittsburgh Medical Center (UPMC) Hillman Cancer Center, Pittsburgh, PA, United States.
John M KirkwoodDepartment of Medicine, Hillman Cancer Center, Division of Hematology/Oncology; University of Pittsburgh Medical Center, Pittsburgh, PA, United States.
Walter J StorkusDepartment of Immunology, University of Pittsburgh School of Medicine, Pittsburgh, PA, United States.
University of Pittsburgh Medical Center · USUPMC Hillman Cancer Center · USMoffitt Cancer Center · USJordan University of Science and Technology · JODana-Farber Brigham Cancer Center · US

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHRISTOPHER J. BAKKENIST · 1988 to 2026
$158.0M
Targeting the Chemokine System to Sensitize Tumors to ImmunotherapyP01CA234212 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI KALINSKI, PAWEL · 2020 to 2024
$10.1M
Training in Cellular & Molecular Mechanisms of Tumor RejectionT32CA082084 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Robert J Binder, Dario AA Vignali · 1999 to 2026
$9.2M
Vaccine Targeting of RCC Blood Vessels to Promote TME Normalization and Enhance TIL RecruitmentR01CA249811 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MARANCHIE, JODI KATHLEEN, STORKUS, WALTER J. · 2021 to 2025
$2.3M
NCI NIH HHS P30 CA047904NCI NIH HHS R01 CA249811NCI NIH HHS T32 CA082084
6 · The paper itself

Abstract

Background: Proinflammatory chemokines/cytokines support development and maturation of tertiary lymphoid structures (TLS) within the tumor microenvironment (TME). In the current study, we sought to investigate the prognostic value of TLS-associated chemokines/cytokines (TLS-kines) expression levels in melanoma patients by performing serum protein and tissue transcriptomic analyses, and to then correlate these data with patients clinicopathological and TME characteristics. Methods: Levels of TLS-kines in patients' sera were quantitated using a custom Luminex Multiplex Assay. The Cancer Genomic Atlas melanoma cohort (TCGA-SKCM) and a Moffitt Melanoma cohort were used for tissue transcriptomic analyses. Associations between target analytes and survival outcomes, clinicopathological variables, and correlations between TLS-kines were statistically analyzed. Results: Serum of 95 patients with melanoma were evaluated; 48 (50%) female, median age of 63, IQR 51-70 years. Serum levels of APRIL/TNFSF13 were positively correlated with levels of both CXCL10 and CXCL13. In multivariate analyses, high levels of serum APRIL/TNFSF13 were associated with improved event-free survival after adjusting for age and stage (HR = 0.64, 95% CI 0.43-0.95; p = 0.03). High expression of Conclusion: Serum protein and tumor transcript levels of APRIL/TNFSF13 are associated with improved survival outcomes. Patients exhibiting high coordinate expression of

Indexed as

MelanomaAgedCytokinesFemaleGene Expression ProfilingGenomicsHumansMaleMiddle AgedPrognosisTumor MicroenvironmentCytokinesAPRILchemokinecytokinelymphoid aggregatemelanomasurvivaltertiary lymphoid structureTNFSF13

Identifiers

PMID37435077
PMCPMC10332263
OpenAlexW4381856340

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.