Evidence map›Paper›PMID 37434091›Full record

ArticleJournal of cancer research and clinical oncology2023

A clinical decision support system to predict the efficacy for EGFR-TKIs based on artificial neural network.

Xiao Liang, Runwei Guan, Jiamin Zhu, Yue Meng, Jing Zhu, Yuxiang Yang, Yanan Cui, Jiali Dai, Weidong Mao, Liting Lv and 2 more

Open access · greenAbstract readMulticenter Study
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Xiao Liang *Department of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Runwei Guan *School of Electronics and Computer Science, University of Southampton, Southampton, UK.
Jiamin Zhu *Department of Oncology, Jiangyin People's Hospital, Jiangyin, China.
Yue Meng *Department of Oncology, Affiliated Hospital of Nantong University, Nantong, China.
Jing ZhuDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Yuxiang YangSchool of Computer Science and Engineering, Northeastern University, Shenyang, China.
Yanan CuiDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Jiali DaiDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Weidong MaoDepartment of Oncology, Jiangyin People's Hospital, Jiangyin, China.
Liting LvDepartment of Oncology, Affiliated Hospital of Nantong University, Nantong, China. 645829671@qq.com.
Dong ShenDepartment of Oncology, Jiangyin People's Hospital, Jiangyin, China. shendong@ntu.edu.cn.
Renhua GuoDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China. rhguo@njmu.edu.cn.
Jiangyin People's Hospital · CNNanjing Medical University · CNAffiliated Hospital of Nantong University · CNNortheastern University · CNUniversity of Southampton · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe efficacy of epidermal growth factor receptor (EGFR)-tyrosine kinase inhibitor (TKI) was affected by numerous factors. In the study, we developed and validated an artificial neural network (ANN) system based on clinical characteristics and next-generation sequencing (NGS) to support clinical decisions.

methodsA multicenter retrospective non-interventional study was conducted. 240 patients from three hospitals with advanced non-small cell lung cancer (NSCLC) and EGFR mutation were tested by NGS before the first treatment. All patients received formal EGFR-TKIs treatment. Five different models were individually trained to predict the efficacy of EGFR-TKIs based on one medical center with 188 patients. Two independent cohorts from other medical centers were collected for external validation.

resultsCompared with logistic regression, four machine learning methods showed better predicting abilities for EGFR-TKIs. The inclusion of NGS tests improved the predictive power of models. ANN performed best on the dataset with mutations TP53, RB1, PIK3CA, EGFR mutation sites, and tumor mutation burden (TMB). The prediction accuracy, recall and AUC were 0.82, 0.82, and 0.82, respectively in our final model. In the external validation set, ANN still showed good performance and differentiated patients with poor outcomes. Finally, a clinical decision support software based on ANN was developed and provided a visualization interface for clinicians.

conclusionThis study provides an approach to assess the efficacy of NSCLC patients with first-line EGFR-TKI treatment. Software is developed to support clinical decisions.

Indexed as

Carcinoma, Non-Small-Cell LungDecision Support Systems, ClinicalLung NeoplasmsErbB ReceptorsHumansMutationNeural Networks, ComputerProtein Kinase InhibitorsRetrospective StudiesEGFR protein, humanErbB ReceptorsProtein Kinase InhibitorsANNEGFR-TKIsNGSNSCLCTMBTP53

Identifiers

PMID37434091
PMCPMC11797839
OpenAlexW4383875713

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.