Evidence map›Paper›PMID 37433808›Full record

ArticleScientific reports2023

Extended performance analysis of deep-learning algorithms for mice vocalization segmentation.

Daniele Baggi, Marika Premoli, Alessandro Gnutti, Sara Anna Bonini, Riccardo Leonardi, Maurizio Memo, Pierangelo Migliorati

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In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Daniele BaggiDepartment of Information Engineering, University of Brescia, Brescia, Italy.
Marika PremoliDepartment of Molecular and Translational Medicine, University of Brescia, Brescia, Italy.
Alessandro GnuttiDepartment of Information Engineering, University of Brescia, Brescia, Italy. alessandro.gnutti@unibs.it.
Sara Anna BoniniDepartment of Molecular and Translational Medicine, University of Brescia, Brescia, Italy.
Riccardo LeonardiDepartment of Information Engineering, University of Brescia, Brescia, Italy.
Maurizio MemoDepartment of Molecular and Translational Medicine, University of Brescia, Brescia, Italy.
Pierangelo MiglioratiDepartment of Information Engineering, University of Brescia, Brescia, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ultrasonic vocalizations (USVs) analysis represents a fundamental tool to study animal communication. It can be used to perform a behavioral investigation of mice for ethological studies and in the field of neuroscience and neuropharmacology. The USVs are usually recorded with a microphone sensitive to ultrasound frequencies and then processed by specific software, which help the operator to identify and characterize different families of calls. Recently, many automated systems have been proposed for automatically performing both the detection and the classification of the USVs. Of course, the USV segmentation represents the crucial step for the general framework, since the quality of the call processing strictly depends on how accurately the call itself has been previously detected. In this paper, we investigate the performance of three supervised deep learning methods for automated USV segmentation: an Auto-Encoder Neural Network (AE), a U-NET Neural Network (UNET) and a Recurrent Neural Network (RNN). The proposed models receive as input the spectrogram associated with the recorded audio track and return as output the regions in which the USV calls have been detected. To evaluate the performance of the models, we have built a dataset by recording several audio tracks and manually segmenting the corresponding USV spectrograms generated with the Avisoft software, producing in this way the ground-truth (GT) used for training. All three proposed architectures demonstrated precision and recall scores exceeding [Formula: see text], with UNET and AE achieving values above [Formula: see text], surpassing other state-of-the-art methods that were considered for comparison in this study. Additionally, the evaluation was extended to an external dataset, where UNET once again exhibited the highest performance. We suggest that our experimental results may represent a valuable benchmark for future works.

Indexed as

Deep LearningAlgorithmsAnimal CommunicationAnimalsMiceNeural Networks, ComputerSoftware

Identifiers

PMID37433808
PMCPMC10336146

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.