Evidence map›Paper›PMID 37432770›Full record

ArticleMolecular biology and evolution2023

Transition to Self-compatibility Associated With Dominant S-allele in a Diploid Siberian Progenitor of Allotetraploid Arabidopsis kamchatica Revealed by Arabidopsis lyrata Genomes.

Uliana K Kolesnikova, Alison Dawn Scott, Jozefien D Van de Velde, Robin Burns, Nikita P Tikhomirov, Ursula Pfordt, Andrew C Clarke, Levi Yant, Alexey P Seregin, Xavier Vekemans and 2 more

Abstract read
In one paragraph

Article in Molecular biology and evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Uliana K KolesnikovaDepartment of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany.
Alison Dawn ScottDepartment of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0002-4508-2973
Jozefien D Van de VeldeDepartment of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany.
Robin BurnsDepartment of Plant Sciences, University of Cambridge, Cambridge, United Kingdom.
Nikita P TikhomirovFaculty of Biology, Lomonosov Moscow State University, Moscow, Russia.
Ursula PfordtDepartment of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany.
Andrew C ClarkeFuture Food Beacon of Excellence and School of Biosciences, University of Nottingham, Sutton Bonington, United Kingdom.
Levi YantFuture Food Beacon of Excellence and School of Life Sciences, University of Nottingham, Nottingham, United Kingdom.
Alexey P SereginHerbarium (MW), Faculty of Biology, M. V. Lomonosov Moscow State University, Moscow, Russia.
Xavier VekemansUniversity Lille, CNRS, UMR 8198-Evo-Eco-Paleo, Lille, France.
Stefan LaurentDepartment of Comparative Development and Genetics, Max Planck Institute for Plant Breeding Research, Cologne, Germany.ORCID 0000-0003-4016-5427
Polina Yu NovikovaDepartment of Chromosome Biology, Max Planck Institute for Plant Breeding Research, Cologne, Germany.

Funding

Austrian Science Fund FWF P 30208
6 · The paper itself

Abstract

A transition to selfing can be beneficial when mating partners are scarce, for example, due to ploidy changes or at species range edges. Here, we explain how self-compatibility evolved in diploid Siberian Arabidopsis lyrata, and how it contributed to the establishment of allotetraploid Arabidopsis kamchatica. First, we provide chromosome-level genome assemblies for two self-fertilizing diploid A. lyrata accessions, one from North America and one from Siberia, including a fully assembled S-locus for the latter. We then propose a sequence of events leading to the loss of self-incompatibility in Siberian A. lyrata, date this independent transition to ∼90 Kya, and infer evolutionary relationships between Siberian and North American A. lyrata, showing an independent transition to selfing in Siberia. Finally, we provide evidence that this selfing Siberian A. lyrata lineage contributed to the formation of the allotetraploid A. kamchatica and propose that the selfing of the latter is mediated by the loss-of-function mutation in a dominant S-allele inherited from A. lyrata.

Indexed as

ArabidopsisDiploidyAllelesBiological EvolutionPloidiesallopolyploidyArabidopsis kamchaticaArabidopsis lyrataself-compatibilityS-locus

Identifiers

PMID37432770
PMCPMC10335350

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.