Evidence map›Paper›PMID 37430310›Full record

ArticleJournal of occupational medicine and toxicology (London, England)2023

Microbiota and mycobiota in bronchoalveolar lavage fluid of silicosis patients.

Linshen Xie, Xiaoyan Zhang, Xiaosi Gao, Linyao Wang, Yiyang Cheng, Shirong Zhang, Ji Yue, Yingru Tang, Yufeng Deng, Baochao Zhang and 9 more

Abstract read
In one paragraph

Article in Journal of occupational medicine and toxicology (London, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Linshen XieWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Xiaoyan ZhangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Xiaosi GaoWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Linyao WangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Yiyang ChengWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Shirong ZhangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Ji YueWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Yingru TangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Yufeng DengWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Baochao ZhangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Xun HeWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Mingyuan TangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Hua YangWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Tianli ZhengWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Jia YouWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Xuejiao SongWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.
Jingyuan XiongWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China. jzx0004@tigermail.auburn.edu.ORCID http://orcid.org/0000-0001-9354-862X
Haojiang ZuoWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China. 378445968@qq.com.ORCID http://orcid.org/0000-0002-8311-7006
Xiaofang PeiWest China School of Public Health and West China Fourth Hospital, Sichuan University, Chengdu, 610041, China.

Funding

Chengdu Science and Technology Bureau 2019-YF05-01247-SNDepartment of Science and Technology of Sichuan Province 2019YJ0018Department of Science and Technology of Sichuan Province 2021YFS0182Department of Science and Technology of Sichuan Province 2021YJ0156Sichuan University Innovation Program C2020109103Sichuan University Innovation Program C2022120052Sichuan University Innovation Program C2023125151Yibin Science and Technology Bureau 2021NY006
6 · The paper itself

Abstract

backgroundThe contribution of bronchoalveolar lavage fluid (BALF) microbiota and mycobiota to silicosis has recently been noticed. However, many confounding factors can influence the accuracy of BALF microbiota and mycobiota studies, resulting in inconsistencies in the published results. In this cross-sectional study, we systematically investigated the effects of "sampling in different rounds of BALF" on its microbiota and mycobiota. We further explored the relationship between silicosis fatigue and the microbiota and mycobiota.

methodsAfter obtaining approval from the ethics board, we collected 100 BALF samples from 10 patients with silicosis. Demographic data, clinical information, and blood test results were also collected from each patient. The characteristics of the microbiota and mycobiota were defined using next-generation sequencing. However, no non-silicosis referent group was examined, which was a major limitation of this study.

resultsOur analysis indicated that subsampling from different rounds of BALF did not affect the alpha- and beta-diversities of microbial and fungal communities when the centrifuged BALF sediment was sufficient for DNA extraction. In contrast, fatigue status significantly influenced the beta-diversity of microbes and fungi (Principal Coordinates Analysis, P = 0.001; P = 0.002). The abundance of Vibrio alone could distinguish silicosis patients with fatigue from those without fatigue (area under the curve = 0.938, 95% confidence interval [CI] 0.870-1.000). Significant correlations were found between Vibrio and haemoglobin levels (P < 0.001, ρ = -0.64).

conclusionsSampling in different rounds of BALF showed minimal effect on BALF microbial and fungal diversities; the first round of BALF collection was recommended for microbial and fungal analyses for convenience. In addition, Vibrio may be a potential biomarker for silicosis fatigue screening.

Indexed as

BALFFatigueMicrobiotaMycobiotaSilicosisVibrio

Identifiers

PMID37430310
PMCPMC10332100

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.