Evidence map›Paper›PMID 37428018›Full record

ArticleeLife2023

Phosphorylation of tyrosine 90 in SH3 domain is a new regulatory switch controlling Src kinase.

Lenka Koudelková, Markéta Pelantová, Zuzana Brůhová, Martin Sztacho, Vojtěch Pavlík, Dalibor Pánek, Jakub Gemperle, Pavel Talacko, Jan Brábek, Daniel Rösel

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Lenka KoudelkováDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.ORCID 0000-0003-0635-4232
Markéta PelantováDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Zuzana BrůhováDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Martin SztachoDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Vojtěch PavlíkDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Dalibor PánekImaging Methods Core Facility at BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Jakub GemperleDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Pavel TalackoProteomics Core Facility at BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Jan BrábekDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.
Daniel RöselDepartment of Cell Biology, BIOCEV, Faculty of Science, Charles University, Vestec, Czech Republic.ORCID 0000-0001-7221-8672
Charles University · CZCzech Academy of Sciences · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The activation of Src kinase in cells is strictly controlled by intramolecular inhibitory interactions mediated by SH3 and SH2 domains. They impose structural constraints on the kinase domain holding it in a catalytically non-permissive state. The transition between inactive and active conformation is known to be largely regulated by the phosphorylation state of key tyrosines 416 and 527. Here, we identified that phosphorylation of tyrosine 90 reduces binding affinity of the SH3 domain to its interacting partners, opens the Src structure, and renders Src catalytically active. This is accompanied by an increased affinity to the plasma membrane, decreased membrane motility, and slower diffusion from focal adhesions. Phosphorylation of tyrosine 90 controlling SH3-medited intramolecular inhibitory interaction, analogical to tyrosine 527 regulating SH2-C-terminus bond, enables SH3 and SH2 domains to serve as cooperative but independent regulatory elements. This mechanism allows Src to adopt several distinct conformations of varying catalytic activities and interacting properties, enabling it to operate not as a simple switch but as a tunable regulator functioning as a signalling hub in a variety of cellular processes.

Indexed as

src-Family Kinasessrc Homology DomainsPhosphorylationProtein-Tyrosine KinasesTyrosineProtein-Tyrosine Kinasessrc-Family KinasesTyrosinebiochemistrycell biologycell transformationchemical biologyinvasivenessmousephosphorylationprotein structureSH3 domainSrc

Identifiers

PMID37428018
PMCPMC10361714
OpenAlexW4383710050

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.