ArticleFrontiers in microbiology2023
Polymeric carbohydrates utilization separates microbiomes into niches: insights into the diversity of microbial carbohydrate-active enzymes in the inner shelf of the Pearl River Estuary, China.
Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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9 citing papers in PubMed, 21 citations in OpenAlex.
- Exploring biochar-mediated remediation of tetracycline-contaminated soil via a metagenomic approach: insights into soil microbial community and potential functions.Archives of microbiology · 2026Article
- Septic Shock Caused by Coinfection of Shewanella algae Bloodstream Infection and Epstein-Barr Virus: Clinical Characteristics and Genomic Analysis.MicrobiologyOpen · 2026Article
- Identifying potential keystone bacterial species within the phycosphere of marine algae and unveiling their metabolic characteristics.Marine life science & technology · 2025Article
- Recent progress on the biological degradation and solubilization of coal.Biodegradation · 2025Review
- Rumen Microbiota in Cattle and Buffaloes: Insights into Host-Specific Bacterial Diversity.Biology · 2025Article
- Insights into putative alginate lyases from epipelagic and mesopelagic communities of the global ocean.Scientific reports · 2025Article
- Together throughout the year: seasonal patterns of bacterial and eukaryotic microbial communities in a macrotidal estuary.Environmental microbiome · 2025Article
- Phylogenetic diversity and community structure ofFrontiers in microbiology · 2025Article
- Comparative genomic analyses of aerobic planctomycetes isolated from the deep sea and the ocean surface.Antonie van Leeuwenhoek · 2024Article
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Authors and funding
9 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Polymeric carbohydrates are abundant and their recycling by microbes is a key process of the ocean carbon cycle. A deeper analysis of carbohydrate-active enzymes (CAZymes) can offer a window into the mechanisms of microbial communities to degrade carbohydrates in the ocean. In this study, metagenomic genes encoding microbial CAZymes and sugar transporter systems were predicted to assess the microbial glycan niches and functional potentials of glycan utilization in the inner shelf of the Pearl River Estuary (PRE). The CAZymes gene compositions were significantly different between in free-living (0.2-3 μm, FL) and particle-associated (>3 μm, PA) bacteria of the water column and between water and surface sediments, reflecting glycan niche separation on size fraction and selective degradation in depth. Proteobacteria and Bacteroidota had the highest abundance and glycan niche width of CAZymes genes, respectively. At the genus level,
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