Evidence map›Paper›PMID 37423943›Full record

ArticleJournal of human genetics2023

Identification of small-sized intrachromosomal segments at the ends of INV-DUP-DEL patterns.

Keiko Shimojima Yamamoto, Takeaki Tamura, Nobuhiko Okamoto, Eriko Nishi, Atsuko Noguchi, Ikuko Takahashi, Yukio Sawaishi, Masaki Shimizu, Hitoshi Kanno, Yohei Minakuchi and 2 more

Abstract read
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Article in Journal of human genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Determinants of dicentric chromosome breakage inbioRxiv : the preprint server for biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Keiko Shimojima YamamotoDepartment of Transfusion Medicine and Cell Processing, Tokyo Women's Medical University, Tokyo, 162-8666, Japan.ORCID http://orcid.org/0000-0003-2362-3844
Takeaki TamuraDepartment of Pediatrics and Child Health, Nihon University School of Medicine, Tokyo, 173-8610, Japan.
Nobuhiko OkamotoDepartment of Medical Genetics, Osaka Women's and Children's Hospital, Izumi, 594-1101, Japan.
Eriko NishiDepartment of Medical Genetics, Osaka Women's and Children's Hospital, Izumi, 594-1101, Japan.
Atsuko NoguchiDepartment of Pediatrics, Akita University Graduate School of Medicine, Akita, 010-8543, Japan.
Ikuko TakahashiDepartment of Pediatrics, Akita University Graduate School of Medicine, Akita, 010-8543, Japan.
Yukio SawaishiDepartment of Pediatrics, Akita Prefectural Center on Development and Disability, Akita, 010-0000, Japan.
Masaki ShimizuDepartment of Pediatrics and Developmental Biology, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University, Tokyo, 113-8519, Japan.
Hitoshi KannoDepartment of Transfusion Medicine and Cell Processing, Tokyo Women's Medical University, Tokyo, 162-8666, Japan.ORCID http://orcid.org/0000-0002-0893-4030
Yohei MinakuchiDepartment of Genomics and Evolutionary Biology, National Institute of Genetics, Mishima, Shizuoka, 411-0801, Japan.
Atsushi ToyodaDepartment of Genomics and Evolutionary Biology, National Institute of Genetics, Mishima, Shizuoka, 411-0801, Japan.
Toshiyuki YamamotoInstitute of Medical Genetics, Tokyo Women's Medical University, Tokyo, 162-8666, Japan. yamamoto.toshiyuki@twmu.ac.jp.ORCID http://orcid.org/0000-0002-9484-3505
Akita University · JPNational Institute of Genetics · JPOsaka Women's and Children's Hospital · JPTokyo Women's Medical University · JPNihon University · JPTokyo Medical and Dental University · JPTokyo Women's Medical University Adachi Medical Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mechanism of chromosomal rearrangement associated with inverted-duplication-deletion (INV-DUP-DEL) pattern formation has been investigated by many researchers, and several possible mechanisms have been proposed. Currently, fold-back and subsequent dicentric chromosome formation has been established as non-recurrent INV-DUP-DEL pattern formation mechanisms. In the present study, we analyzed the breakpoint junctions of INV-DUP-DEL patterns in five patients using long-read whole-genome sequencing and detected 2.2-6.1 kb copy-neutral regions in all five patients. At the end of the INV-DUP-DEL, two patients exhibited chromosomal translocations, which are recognized as telomere capture, and one patient showed direct telomere healing. The remaining two patients had additional small-sized intrachromosomal segments at the end of the derivative chromosomes. These findings have not been previously reported but they may only be explained by the presence of telomere capture breakage. Further investigations are required to better understand the mechanisms underlying this finding.

Indexed as

Chromosome DeletionChromosome DuplicationChromosome InversionChildChild, PreschoolChromosome BreakpointsFemaleHumansIn Situ Hybridization, FluorescenceMaleTelomereTranslocation, GeneticWhole Genome Sequencing

Identifiers

PMID37423943
OpenAlexW4383710103

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.