Evidence map›Paper›PMID 37422856›Full record

ArticleThe FEBS journal2023

A design logic for sequential segmentation across organisms.

M Fethullah Simsek, Ertuğrul M Özbudak

Abstract read
In one paragraph

Article in The FEBS journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

M Fethullah SimsekDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, OH, USA.ORCID 0000-0002-5873-0714
Ertuğrul M ÖzbudakDivision of Developmental Biology, Cincinnati Children's Hospital Medical Center, OH, USA.ORCID 0000-0003-2858-4696

Funding

Integration of spatiotemporal signaling for pattern formation and scalingR01HD103623 · NICHD · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Ertugrul M Ozbudak · 2021 to 2026
$2.4M
NICHD NIH HHS R01 HD103623
6 · The paper itself

Abstract

Multitudes of organisms display metameric compartmentalization of their body plan. Segmentation of these compartments happens sequentially in diverse phyla. In several sequentially segmenting species, periodically active molecular clocks and signaling gradients have been found. The clocks are proposed to control the timing of segmentation, while the gradients are proposed to instruct the positions of segment boundaries. However, the identity of the clock and gradient molecules differs across species. Furthermore, sequential segmentation of a basal chordate, Amphioxus, continues at late stages when the small tail bud cell population cannot establish long-range signaling gradients. Thus, it remains to be explained how a conserved morphological trait (i.e., sequential segmentation) is achieved by using different molecules or molecules with different spatial profiles. Here, we first focus on sequential segmentation of somites in vertebrate embryos and then draw parallels with other species. Thereafter, we propose a candidate design principle that has the potential to answer this puzzling question.

Indexed as

Signal TransductionVertebratesAnimalsBody PatterningGene Expression Regulation, DevelopmentalLogicSomitescell signalingclockpattern formationsegmentation

Identifiers

PMID37422856
PMCPMC10774455

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.