Evidence map›Paper›PMID 37420408›Full record

ArticleEntropy (Basel, Switzerland)2022

Entropy as a Geometrical Source of Information in Biological Organizations.

Juan Lopez-Sauceda, Philipp von Bülow, Carlos Ortega-Laurel, Francisco Perez-Martinez, Kalina Miranda-Perkins, José Gerardo Carrillo-González

Abstract read
In one paragraph

Article in Entropy (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Mathematical Modeling in Systems Biology.Entropy (Basel, Switzerland) · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Juan Lopez-SaucedaConsejo Nacional de Ciencia y Tecnología (CONACYT), Avenida Insurgentes Sur 1582, Colonia Crédito Constructor, Alcaldía Benito Juárez, Mexico City 03940, Mexico.ORCID 0000-0001-5174-6046
Philipp von BülowDepartamento de Procesos Productivos, Universidad Autónoma Metropolitana, Avenida de las Garzas No. 10, Colonia El Panteón, Lerma de Villada 52005, Mexico.
Carlos Ortega-LaurelDepartamento de Sistemas de Información y Comunicaciones, Universidad Autónoma Metropolitana, Avenida de las Garzas No. 10, Colonia El Panteón, Lerma de Villada 52005, Mexico.ORCID 0000-0001-6072-8480
Francisco Perez-MartinezDepartamento de Sistemas de Información y Comunicaciones, Universidad Autónoma Metropolitana, Avenida de las Garzas No. 10, Colonia El Panteón, Lerma de Villada 52005, Mexico.ORCID 0000-0001-5770-7849
Kalina Miranda-PerkinsSecretaría de Medio Ambiente y Recursos Naturales (SEMARNAT), Avenida Ejército Nacional 223, Colonia Anáhuac, Alcaldía Miguel Hidalgo, Mexico City 11320, Mexico.
José Gerardo Carrillo-GonzálezConsejo Nacional de Ciencia y Tecnología (CONACYT), Avenida Insurgentes Sur 1582, Colonia Crédito Constructor, Alcaldía Benito Juárez, Mexico City 03940, Mexico.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Considering both biological and non-biological polygonal shape organizations, in this paper we introduce a quantitative method which is able to determine informational entropy as spatial differences between heterogeneity of internal areas from simulation and experimental samples. According to these data (i.e., heterogeneity), we are able to establish levels of informational entropy using statistical insights of spatial orders using discrete and continuous values. Given a particular state of entropy, we establish levels of information as a novel approach which can unveil general principles of biological organization. Thirty-five geometric aggregates are tested (biological, non-biological, and polygonal simulations) in order to obtain the theoretical and experimental results of their spatial heterogeneity. Geometrical aggregates (meshes) include a spectrum of organizations ranging from cell meshes to ecological patterns. Experimental results for discrete entropy using a bin width of 0.5 show that a particular range of informational entropy (0.08 to 0.27 bits) is intrinsically associated with low rates of heterogeneity, which indicates a high degree of uncertainty in finding non-homogeneous configurations. In contrast, differential entropy (continuous) results reflect negative entropy within a particular range (-0.4 to -0.9) for all bin widths. We conclude that the differential entropy of geometrical organizations is an important source of neglected information in biological systems.

Indexed as

differential entropydiscrete entropygeometrical informationheterogeneityinformation theory

Identifiers

PMID37420408
PMCPMC9601958

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.