Evidence map›Paper›PMID 37419909›Full record

ArticleNature communications2023

Membrane translocation process revealed by in situ structures of type II secretion system secretins.

Zhili Yu, Yaoming Wu, Muyuan Chen, Tong Huo, Wei Zheng, Steven J Ludtke, Xiaodong Shi, Zhao Wang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Zhili Yu *Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Yaoming Wu *Jiangsu Province Key Laboratory of Anesthesiology and Jiangsu Province Key Laboratory of Anesthesia and Analgesia Application, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China.
Muyuan ChenVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Tong HuoVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.
Wei ZhengJiangsu Province Key Laboratory of Anesthesiology and Jiangsu Province Key Laboratory of Anesthesia and Analgesia Application, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China.
Steven J LudtkeVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA.ORCID 0000-0002-1903-1574
Xiaodong ShiJiangsu Province Key Laboratory of Anesthesiology and Jiangsu Province Key Laboratory of Anesthesia and Analgesia Application, Xuzhou Medical University, Xuzhou, Jiangsu, 221004, China. shixd@xzhmu.edu.cn.
Zhao WangVerna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX, 77030, USA. zhaow@bcm.edu.ORCID 0000-0003-4897-9986
Baylor College of Medicine · USXuzhou Medical College · CN

Funding

SUPPORT AND DEVELOPMENT OF EMAN FOR ELECTRON MICROSCOPY IMAGE PROCESSINGR01GM080139 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI LUDTKE, STEVEN J · 2006 to 2022
$5.4M
Molecular Assembly of Bacterial Tripartite Multidrug Efflux PumpsR01AI179879 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI Zhao Wang · 2024 to 2026
$1.9M
Molecular mechanism of Androgen Receptor mediated transcriptionR01GM143380 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI WANG, ZHAO · 2021 to 2025
$1.7M
Investigation of the Cellular and Molecular Mechanisms of Thrombocyte Integrin SignalingR01HL162842 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI WANG, ZHAO · 2022 to 2025
$1.6M
NHLBI NIH HHS R01 HL162842NIAID NIH HHS R01 AI179879NIGMS NIH HHS R01 GM080139NIGMS NIH HHS R01 GM143380
6 · The paper itself

Abstract

The GspD secretin is the outer membrane channel of the bacterial type II secretion system (T2SS) which secrets diverse toxins that cause severe diseases such as diarrhea and cholera. GspD needs to translocate from the inner to the outer membrane to exert its function, and this process is an essential step for T2SS to assemble. Here, we investigate two types of secretins discovered so far in Escherichia coli, GspD

Indexed as

Escherichia coli ProteinsType II Secretion SystemsBacterial Outer Membrane ProteinsBacterial ProteinsEscherichia coliSecretinBacterial Outer Membrane ProteinsBacterial ProteinsEscherichia coli ProteinsSecretinType II Secretion Systems

Identifiers

PMID37419909
PMCPMC10329019
OpenAlexW4383557198

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.