Evidence map›Paper›PMID 37417734›Full record

ArticleeLife2023

The Opto-inflammasome in zebrafish as a tool to study cell and tissue responses to speck formation and cell death.

Eva Hasel de Carvalho, Shivani S Dharmadhikari, Kateryna Shkarina, Jingwei Rachel Xiong, Bruno Reversade, Petr Broz, Maria Leptin

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Chemical reviews · 2026
    Review
  2. Article
  3. Targeted Activation of Programmed Cell Death Pathways by Optogenetics.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 5 countries.

Eva Hasel de CarvalhoEuropean Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0002-3067-2874
Shivani S DharmadhikariEuropean Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0003-2804-9079
Kateryna ShkarinaDepartment of Biochemistry, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-2177-4844
Jingwei Rachel XiongSkin Research Laboratories, A*STAR, Singapore, Singapore.
Bruno ReversadeInstitute of Molecular and Cell Biology, A*STAR, Singapore, Singapore.ORCID 0000-0002-4070-7997
Petr BrozDepartment of Biochemistry, University of Lausanne, Lausanne, Switzerland.ORCID 0000-0002-2334-7790
Maria LeptinEuropean Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0001-7097-348X
European Molecular Biology Laboratory · DEAgency for Science, Technology and Research · SGUniversity of Lausanne · CH

Funding

European Research Council ERC2017-CoG-770988-InflamCellDeathSwiss National Science Foundation 175576Swiss National Science Foundation 198005
6 · The paper itself

Abstract

The inflammasome is a conserved structure for the intracellular detection of danger or pathogen signals. As a large intracellular multiprotein signaling platform, it activates downstream effectors that initiate a rapid necrotic programmed cell death (PCD) termed pyroptosis and activation and secretion of pro-inflammatory cytokines to warn and activate surrounding cells. However, inflammasome activation is difficult to control experimentally on a single-cell level using canonical triggers. We constructed Opto-ASC, a light-responsive form of the inflammasome adaptor protein ASC (Apoptosis-Associated Speck-Like Protein Containing a CARD) which allows tight control of inflammasome formation in vivo. We introduced a cassette of this construct under the control of a heat shock element into zebrafish in which we can now induce ASC inflammasome (speck) formation in individual cells of the skin. We find that cell death resulting from ASC speck formation is morphologically distinct from apoptosis in periderm cells but not in basal cells. ASC-induced PCD can lead to apical or basal extrusion from the periderm. The apical extrusion in periderm cells depends on Caspb and triggers a strong Ca

Indexed as

InflammasomesZebrafishAnimalsApoptosisCARD Signaling Adaptor ProteinsCaspase 1NLR Family, Pyrin Domain-Containing 3 ProteinPyroptosisCARD Signaling Adaptor ProteinsCaspase 1InflammasomesNLR Family, Pyrin Domain-Containing 3 Protein0ptogeneticsASC speckcell deathepithelial cellsimmunologyinflammasomeinflammationzebrafish

Identifiers

PMID37417734
PMCPMC10328535
OpenAlexW4383481577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.