Evidence map›Paper›PMID 37416723›Full record

ArticleChemical science2023

Cyclic peptides target the aromatic cage of a PHD-finger reader domain to modulate epigenetic protein function.

Oliver D Coleman, Jessica Macdonald, Ben Thomson, Jennifer A Ward, Christopher J Stubbs, Tom E McAllister, Shane Clark, Siddique Amin, Yimang Cao, Martine I Abboud and 5 more

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  5. Review
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Oliver D ColemanSchool of Natural and Environmental Sciences - Chemistry, Newcastle University Newcastle NE1 7RU UK akane.kawamura@ncl.ac.uk.ORCID https://orcid.org/0000-0002-6205-9636
Jessica MacdonaldDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.
Ben ThomsonDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.
Jennifer A WardTarget Discovery Institute, Nuffield Department of Medicine, University of Oxford Old Road Campus Oxford OX3 7FZ UK.
Christopher J StubbsMechanistic and Structural Biology, Discovery Sciences, R&D, AstraZeneca Cambridge CB4 0WG UK.
Tom E McAllisterSchool of Natural and Environmental Sciences - Chemistry, Newcastle University Newcastle NE1 7RU UK akane.kawamura@ncl.ac.uk.ORCID https://orcid.org/0000-0001-6906-4510
Shane ClarkDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.
Siddique AminSchool of Natural and Environmental Sciences - Chemistry, Newcastle University Newcastle NE1 7RU UK akane.kawamura@ncl.ac.uk.ORCID https://orcid.org/0009-0001-2706-4042
Yimang CaoDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.
Martine I AbboudDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.ORCID https://orcid.org/0000-0003-2141-5988
Yijia ZhangDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.
Hitesh SanganeeEmerging Innovations Unit, Discovery Sciences, R&D, AstraZeneca Cambridge UK.
Kilian V M HuberTarget Discovery Institute, Nuffield Department of Medicine, University of Oxford Old Road Campus Oxford OX3 7FZ UK.ORCID https://orcid.org/0000-0002-1103-5300
Tim D W ClaridgeDepartment of Chemistry, University of Oxford, Chemistry Research Laboratory Mansfield Road Oxford OX1 3TA UK tim.claridge@chem.ox.ac.uk.ORCID https://orcid.org/0000-0001-5583-6460
Akane KawamuraSchool of Natural and Environmental Sciences - Chemistry, Newcastle University Newcastle NE1 7RU UK akane.kawamura@ncl.ac.uk.ORCID https://orcid.org/0000-0003-1169-5082
University of Oxford · GBCentre for Human Genetics · GBAstraZeneca (United Kingdom) · GBNewcastle University · GB

Funding

Cancer Research UK 28285
6 · The paper itself

Abstract

Plant homeodomain fingers (PHD-fingers) are a family of reader domains that can recruit epigenetic proteins to specific histone modification sites. Many PHD-fingers recognise methylated lysines on histone tails and play crucial roles in transcriptional regulation, with their dysregulation linked to various human diseases. Despite their biological importance, chemical inhibitors for targeting PHD-fingers are very limited. Here we report a potent and selective

Identifiers

PMID37416723
PMCPMC10321576
OpenAlexW4366214985

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.