Evidence map›Paper›PMID 37416056›Full record

ArticleNihon Kessho Gakkai shi2023

Continuous Validation Across Macromolecular Structure Determination Process.

Vanessa Bijak, Michal Gucwa, Joanna Lenkiewicz, Krzysztof Murzyn, David R Cooper, Wladek Minor

Open access · diamondAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Nihon Kessho Gakkai shi, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 69% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Vanessa BijakDepartment of Molecular Physiology and Biological Physics, University of Virginia.
Michal GucwaDepartment of Molecular Physiology and Biological Physics, University of Virginia.
Joanna LenkiewiczDepartment of Molecular Physiology and Biological Physics, University of Virginia.
Krzysztof MurzynDepartment of Computational Biophysics and Bioinformatics, Jagiellonian University.
David R CooperDepartment of Molecular Physiology and Biological Physics, University of Virginia.
Wladek MinorDepartment of Molecular Physiology and Biological Physics, University of Virginia.
University of Virginia · USJagiellonian University · PL

Funding

Reproducible, Unbiased Ligand Identification Assisted by Artificial Intelligence and Development of Ligand Reference LibrariesR01GM132595 · NIGMS · UNIVERSITY OF VIRGINIA · PI MINOR, WLADEK · 2019 to 2022
$2.3M
NIGMS NIH HHS R01 GM132595
6 · The paper itself

Abstract

The overall quality of the experimentally determined structures contained in the PDB is exceptionally high, mainly due to the continuous improvement of model building and structural validation programs. Improving reproducibility on a large scale requires expanding the concept of validation in structural biology and all other disciplines to include a broader framework that encompasses the entire project. A successful approach to science requires diligent attention to detail and a focus on the future. An earnest commitment to data availability and reuse is essential for scientific progress, be that by human minds or artificial intelligence.

Identifiers

PMID37416056
PMCPMC10321142
OpenAlexW4323350595

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.