Evidence map›Paper›PMID 37414245›Full record

ArticleThe Journal of investigative dermatology2023

In Silico and In Vitro Analysis of IL36RN Alterations Reveals Critical Residues for the Function of the Interleukin-36 Receptor Complex.

Niina K Hassi, Timir Weston, Giulia Rinaldi, Joseph C Ng, Asma Smahi, Sophie Twelves, Camilla Davan-Wetton, Dana Fakhreddine, Franca Fraternali, Francesca Capon

Open access · hybridAbstract read
In one paragraph

Article in The Journal of investigative dermatology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Niina K HassiDepartment of Medical and Molecular Genetics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom.
Timir WestonRandall Centre for Cell & Molecular Biophysics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom.
Giulia RinaldiDepartment of Medical and Molecular Genetics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom.
Joseph C NgRandall Centre for Cell & Molecular Biophysics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom; Institute of Structural and Molecular Biology, University College London, London, United Kingdom.
Asma SmahiIMAGINE Institute INSERM UMR 1163, Paris, France.
Sophie TwelvesDepartment of Medical and Molecular Genetics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom.
Camilla Davan-WettonDepartment of Medical and Molecular Genetics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom.
Dana FakhreddineDepartment of Medical and Molecular Genetics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom.
Franca FraternaliRandall Centre for Cell & Molecular Biophysics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom; Institute of Structural and Molecular Biology, University College London, London, United Kingdom.
Francesca CaponDepartment of Medical and Molecular Genetics, School of Basic and Medical Biosciences, King's College London, London, United Kingdom. Electronic address: francesca.capon@kcl.ac.uk.
King's College London · GBInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Generalized pustular psoriasis is a potentially life-threatening skin disease, associated with IL36RN disease alleles. IL36RN encodes the IL-36 receptor antagonist (IL-36Ra), a protein that downregulates the activity of IL-36 cytokines by blocking their receptor (IL-36R). Although generalized pustular psoriasis can be treated with IL-36R inhibitors, the structural underpinnings of the IL-36Ra/IL-36R interaction remain poorly understood. In this study, we sought to address this question by systematically investigating the effects of IL36RN sequence changes. We experimentally characterized the effects of 30 IL36RN variants on protein stability. In parallel, we used a machinelearning tool (Rhapsody) to analyze the IL-36Ra three-dimensional structure and predict the impact of all possible amino acid substitutions. This integrated approach identified 21 amino acids that are essential for IL-36Ra stability. We next investigated the effects of IL36RN changes on IL-36Ra/IL-36R binding and IL-36R signaling. Combining invitro assays and machine learning with a second program (mCSM), we identified 13 amino acids that are critical for IL-36Ra/IL36R engagement. Finally, we experimentally validated three representative predictions, further confirming the reliability of Rhapsody and mCSM. These findings shed light on the structural determinants of IL-36Ra activity, with potential to facilitate the design of new IL-36 inhibitors and aid the interpretation of IL36RN variants in diagnostic settings.

Indexed as

ExanthemaPsoriasisSkin Diseases, VesiculobullousAmino AcidsAmino Acid SubstitutionHumansInterleukinsReceptors, InterleukinReproducibility of ResultsAmino AcidsIL36RN protein, humaninterleukin-36 receptor, humanInterleukinsReceptors, Interleukin

Identifiers

PMID37414245
PMCPMC10824670
OpenAlexW4383105441

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.