Evidence map›Paper›PMID 37409478›Full record

ArticleCirculation. Genomic and precision medicine2023

Leonie M Kurzlechner, Sujata Kishnani, Shawon Chowdhury, Sage L Atkins, Mary E Moya-Mendez, Lauren E Parker, Michael B Rosamilia, Hanna J Tadros, Leslie A Pace, Viraj Patel and 2 more

Abstract read
In one paragraph

Article in Circulation. Genomic and precision medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. PidTools: Algorithm and web tools for crop pedigree identification analysis.Computational and structural biotechnology journal · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Leonie M KurzlechnerDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.ORCID 0000-0002-9305-0669
Sujata KishnaniDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.
Shawon ChowdhuryDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.
Sage L AtkinsDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.
Mary E Moya-MendezDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.ORCID 0000-0003-0845-6750
Lauren E ParkerDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.
Michael B RosamiliaDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.ORCID 0000-0003-1927-7176
Hanna J TadrosDepartment of Pediatrics, Section of Pediatric Cardiology, Baylor College of Medicine, Houston, TX (H.J.T.).ORCID 0000-0002-2348-9262
Leslie A PaceDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.
Viraj PatelNorth West Thames Regional Genetics Service, St Mark's Hospital, London, United Kingdom (V.P.).ORCID 0000-0003-4041-0971
C Anwar A ChahalCenter for Inherited Cardiovascular Diseases, WellSpan Health, Lancaster, PA (C.A.A.C.).ORCID 0000-0001-7825-8827
Andrew P LandstromDepartment of Pediatrics, Division of Pediatric Cardiology (LMK, SK, SC, SLA, MEM-M, LEP, MBR, LAP, APL), Duke University School of Medicine, Durham, NC.ORCID 0000-0002-1878-9631

Funding

Medical Scientist Training Program Training GrantT32GM145449 · NIGMS · DUKE UNIVERSITY · PI Christopher D Kontos · 2022 to 2026
$6.6M
NRSA Training CoreTL1TR002555 · NCATS · DUKE UNIVERSITY · PI EDELMAN, DAVID · 2018 to 2022
$3.7M
Exploring the role of ATP1A3 mutations in sudden unexplained death in epilepsyR01HL160654 · NHLBI · DUKE UNIVERSITY · PI Andrew P. Landstrom · 2022 to 2026
$3.4M
The Role of Junctophilin Type 2 in Cardiac Node AutomaticityK08HL136839 · NHLBI · DUKE UNIVERSITY · PI LANDSTROM, ANDREW P. · 2017 to 2021
$769k
Doris Duke Charitable Foundation 2020098NCATS NIH HHS TL1 TR002555NHLBI NIH HHS K08 HL136839NHLBI NIH HHS R01 HL160654NIGMS NIH HHS T32 GM145449
6 · The paper itself

Abstract

backgroundWith genetic testing advancements, the burden of incidentally identified cardiac disease-associated gene variants is rising. These variants may carry a risk of sudden cardiac death, highlighting the need for accurate diagnostic interpretation. We sought to identify pathogenic hotspots in sudden cardiac death-associated genes using amino acid-level signal-to-noise (S:N) analysis and develop a web-based precision medicine tool,

methodsThe minor allele frequency of putatively pathogenic variants was derived from cohort-based cardiomyopathy and channelopathy studies in the literature. We normalized disease-associated minor allele frequencies to rare variants in an ostensibly healthy population (Genome Aggregation Database) to calculate amino acid-level S:N. Amino acids with S:N above the gene-specific threshold were defined as hotspots.

resultsWe developed

conclusions

Indexed as

CardiomyopathiesChannelopathiesAmino AcidsDeath, Sudden, CardiacGenetic VariationHumansPrecision MedicineVirulenceAmino Acidschannelopathyexome sequencinglong QT syndromeprobabilitysyncope

Identifiers

PMID37409478
PMCPMC10527712

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.