Evidence map›Paper›PMID 37406303›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Inducible disruption of

Hiroshi Yuita, Isaac F López-Moyado, Hyeongmin Jeong, Arthur Xiuyuan Cheng, James Scott-Browne, Jungeun An, Toshinori Nakayama, Atsushi Onodera, Myunggon Ko, Anjana Rao

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Development of Novel Epigenetic Anti-Cancer Therapy Targeting TET Proteins.International journal of molecular sciences · 2023
    Article
  12. Inducible disruption ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Hiroshi YuitaDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.
Isaac F López-MoyadoDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.
Hyeongmin JeongDepartment of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.ORCID 0000-0001-7301-7020
Arthur Xiuyuan ChengDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.
James Scott-BrowneDepartment of Immunology and Genomic Medicine, National Jewish Health, Denver, CO 80206.
Jungeun AnDepartment of Life Sciences, Jeonbuk National University, Jeonju 54896, Republic of Korea.ORCID 0000-0002-6678-0121
Toshinori NakayamaDepartment of Immunology, Graduate School of Medicine, Chiba University, Chiba 260-8670, Japan.ORCID 0000-0002-1434-2007
Atsushi OnoderaDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.
Myunggon KoDepartment of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan 44919, Republic of Korea.
Anjana RaoDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.ORCID 0000-0002-1870-1775
La Jolla Institute for Immunology · USChiba University · JPInstitute for Basic Science · KRJeonbuk National University · KRNational Jewish Health · USUlsan National Institute of Science and Technology · KR

Funding

The TET-DNMT-ASXL1-OGT axis: relevance to clonal hematopoiesis, heterochromatin integrity and cancerR35CA210043 · NCI · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI Anjana Rao · 2016 to 2026
$10.6M
Illumina HiSeq 2500 Sequencing SystemS10OD016262 · OD · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI RAO, ANJANA · 2013 to 2013
$600k
FACSAria II Cell SorterS10RR027366 · NCRR · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI CROFT, MICHAEL · 2011 to 2011
$514k
NCI NIH HHS R35 CA210043NCRR NIH HHS S10 RR027366NIH HHS S10 OD016262
6 · The paper itself

Abstract

The three mammalian TET dioxygenases oxidize the methyl group of 5-methylcytosine in DNA, and the oxidized methylcytosines are essential intermediates in all known pathways of DNA demethylation. To define the in vivo consequences of complete TET deficiency, we inducibly deleted all three

Indexed as

DioxygenasesLeukemia, Myeloid, Acute5-MethylcytosineAnimalsDNA MethylationEuchromatinHeterochromatinMammalsMice5-MethylcytosineDioxygenasesEuchromatinHeterochromatinheterochromatin-to-euchromatin transitionmyeloid expansionreadthrough transcriptionStefinsTET proteins

Identifiers

PMID37406303
PMCPMC9963276
OpenAlexW4318765087

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.